RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.39■□□□□ 0.21
LMX1B-204ENST00000561065 ATP9BO43861 1147 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 RNASEH1O60930 286 aaKnown RBP16.39■□□□□ 0.21
LMX1B-204ENST00000561065 MMP8P22894 467 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 CD27P26842 260 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 NSFP46459 744 aaKnown RBP16.39■□□□□ 0.21
LMX1B-204ENST00000561065 GRIA4P48058 902 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 AFF3P51826 1226 aaKnown RBP16.39■□□□□ 0.21
LMX1B-204ENST00000561065 PPP2CBP62714 309 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 PPP2CAP67775 309 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 SLC14A1Q13336 389 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 ZNF177Q13360 481 aaPredicted RBP16.39■□□□□ 0.21
LMX1B-204ENST00000561065 HLA-BQ31612 363 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 TFAP2DQ7Z6R9 452 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 JOSD2Q8TAC2 188 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 GANCQ8TET4 914 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 SLC6A18Q96N87 628 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 SNX11Q9Y5W9 270 aa16.39■□□□□ 0.21
LMX1B-204ENST00000561065 CFAP47Q6ZTR5 3102 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 A0A0D9SEW6 157 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 ANKRD62A6NC57 917 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 DRGXA6NNA5 263 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 C1QTNF9BB2RNN3 333 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 E9PAM4 449 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 HYAL3O43820 417 aaPredicted RBP16.38■□□□□ 0.21
LMX1B-204ENST00000561065 CBFA2T3O75081 653 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 CER1O95813 267 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 ADH1BP00325 375 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 MT-CO1P00395 513 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 IL1BP01584 269 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 RHOCP08134 193 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 C1QTNF9P0C862 333 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 SRCP12931 536 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 UNGP13051 313 aaPredicted RBP16.38■□□□□ 0.21
LMX1B-204ENST00000561065 ATP1A3P13637 1013 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 GLDCP23378 1020 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
LMX1B-204ENST00000561065 C15orf59Q2T9L4 293 aaPredicted RBP16.38■□□□□ 0.21
LMX1B-204ENST00000561065 SH2D3CQ8N5H7 860 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 OMDQ99983 421 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 SCNM1Q9BWG6 230 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 VPS51Q9UID3 782 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 SLC25A13Q9UJS0 675 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 NEU3Q9UQ49 428 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 HS3ST2Q9Y278 367 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 NCKAP1Q9Y2A7 1128 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 FREM2Q5SZK8 3169 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 PTPRBP23467 1997 aa16.38■□□□□ 0.21
LMX1B-204ENST00000561065 ZZEF1O43149 2961 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 A0A1W2PPC4 97 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 K7ERQ8 282 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 RNF103O00237 685 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 WNT9AO14904 365 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 ENDOD1O94919 500 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 WNT1P04628 370 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 CALB1P05937 261 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 ZNF883P0CG24 379 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 GOT1P17174 413 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 C5AR1P21730 350 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 ATP11AP98196 1134 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 IQCB1Q15051 598 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 DLG2Q15700 870 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 ST3GAL2Q16842 350 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 CDO1Q16878 200 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 POM121L1PQ3SYA9 428 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 LRRC31Q6UY01 552 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 OR7D4Q8NG98 312 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 OR2T34Q8NGX1 318 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 BAHD1Q8TBE0 780 aaPredicted RBP16.37■□□□□ 0.21
LMX1B-204ENST00000561065 MUC3BQ9H195 1237 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 TM7SF3Q9NS93 570 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 SEPT11Q9NVA2 429 aaKnown RBP16.37■□□□□ 0.21
LMX1B-204ENST00000561065 KLK13Q9UKR3 277 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 PCOLCE2Q9UKZ9 415 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 ANKRD6Q9Y2G4 727 aa16.37■□□□□ 0.21
LMX1B-204ENST00000561065 PLXNB3Q9ULL4 1909 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 A0A1B0GTH6 734 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 C2CD4BA6NLJ0 364 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 KCNK3O14649 394 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 SMAD6O43541 496 aaKnown RBP16.36■□□□□ 0.21
LMX1B-204ENST00000561065 KRT37O76014 449 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 CTSLP07711 333 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 TNFAIP3P21580 790 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 RRM1P23921 792 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 NNMTP40261 264 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 CTSKP43235 329 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
LMX1B-204ENST00000561065 SFSWAPQ12872 951 aaKnown RBP16.36■□□□□ 0.21
LMX1B-204ENST00000561065 ZSCAN23Q3MJ62 389 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 CCDC14Q49A88 953 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 MANEALQ5VSG8 457 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 AGBL4Q5VU57 503 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 IL27RAQ6UWB1 636 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 LINGO4Q6UY18 593 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 DCAF4L2Q8NA75 395 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 RXFP2Q8WXD0 754 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 OR8D1Q8WZ84 308 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 GATA6Q92908 595 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 C1orf74Q96LT6 269 aa16.36■□□□□ 0.21
LMX1B-204ENST00000561065 AGPAT1Q99943 283 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms