RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	SLC2A3	P11169	496 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	RRM1	P23921	792 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	KRT9	P35527	623 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	PLK1	P53350	603 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	SULT2A1	Q06520	285 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	SLC12A1	Q13621	1099 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	AGBL4	Q5VU57	503 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	LINGO4	Q6UY18	593 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	PIP4K2C	Q8TBX8	421 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	FZD3	Q9NPG1	666 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	ADAMTS20	P59510	1910 aa		13.76	□□□□□ -0.21
PSME1-208	ENST00000561059	SLC31A1	O15431	190 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	SMAD6	O43541	496 aa	Known RBP	13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	LAT	O43561	262 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	PLRG1	O43660	514 aa	Known RBP	13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	ATP9B	O43861	1147 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	DFNA5	O60443	496 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	CTSL	P07711	333 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	GLI1	P08151	1106 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	JUP	P14923	745 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	GLDC	P23378	1020 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	CLCN1	P35523	988 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	ACADVL	P49748	655 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	SULT1E1	P49888	294 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	TAS2R38	P59533	333 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	SLC6A3	Q01959	620 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	PTK2	Q05397	1052 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	TAF3	Q5VWG9	929 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	NAPEPLD	Q6IQ20	393 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	TFAP2D	Q7Z6R9	452 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	PRPF39	Q86UA1	669 aa	Known RBP	13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	SH2D3C	Q8N5H7	860 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	ATP11C	Q8NB49	1132 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	CHST14	Q8NCH0	376 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	PSMB7	Q99436	277 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	TKTL2	Q9H0I9	626 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	TNKS2	Q9H2K2	1166 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	ASNSD1	Q9NWL6	643 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	MPP6	Q9NZW5	540 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	PPM1H	Q9ULR3	514 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	PCDHGC3	Q9UN70	934 aa		13.75	□□□□□ -0.21
PSME1-208	ENST00000561059	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059		A0A0D9SEW6	157 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	RNGTT	O60942	597 aa	Known RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	RFPL3	O75679	317 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	RHOC	P08134	193 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	SRC	P12931	536 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	ARRB1	P49407	418 aa	Predicted RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	SEMG2	Q02383	582 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	RAPGEF1	Q13905	1077 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	TPD52L1	Q16890	204 aa	Predicted RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	SLC45A4	Q5BKX6	768 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	HES3	Q5TGS1	186 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	FAM46C	Q5VWP2	391 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	SLC26A9	Q7LBE3	791 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	DSG4	Q86SJ6	1040 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	PDCD7	Q8N8D1	485 aa	Known RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	MFSD2A	Q8NA29	543 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	OR7D4	Q8NG98	312 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	GRIN3A	Q8TCU5	1115 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	ARRDC3	Q96B67	414 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	BBC3	Q96PG8	261 aa	Predicted RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	NOX5	Q96PH1	765 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	TBCB	Q99426	244 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	PDCL3	Q9H2J4	239 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	VPS51	Q9UID3	782 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	TP53BP1	Q12888	1972 aa	Predicted RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	URB1	O60287	2271 aa	Known RBP	13.74	□□□□□ -0.21
PSME1-208	ENST00000561059	KALRN	O60229	2985 aa		13.74	□□□□□ -0.21
PSME1-208	ENST00000561059		A0A1W2PQU0	124 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	C1QTNF3-AMACR	E9PGA6	284 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	GOLGA8S	H3BPF8	625 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	KPNA3	O00505	521 aa	Predicted RBP	13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	PES1	O00541	588 aa	Known RBP	13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	MCF2L	O15068	1137 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	SRGAP2	O75044	1071 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	CLDN11	O75508	207 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	MYF5	P13349	255 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	NOS2	P35228	1153 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	CDH4	P55283	916 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	OXCT1	P55809	520 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	DEUP1	Q05D60	604 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	STAT4	Q14765	748 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	PIP5KL1	Q5T9C9	394 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	KANSL1	Q7Z3B3	1105 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	PHLDB2	Q86SQ0	1253 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	TMPRSS12	Q86WS5	348 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	FAM131C	Q96AQ9	280 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	NPY6R	Q99463	290 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	WDCP	Q9H6R7	721 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	2e-6	■□□□□ 8.1
PSME1-208	ENST00000561059	TBC1D30	Q9Y2I9	924 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	FHOD1	Q9Y613	1164 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	ACTL7A	Q9Y615	435 aa		13.73	□□□□□ -0.21
PSME1-208	ENST00000561059	TRIM38	O00635	465 aa		13.72	□□□□□ -0.21
PSME1-208	ENST00000561059	FFAR2	O15552	330 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms