RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 RNF187Q5TA31 235 aaPredicted RBP11.88□□□□□ -0.51
TM2D3-208ENST00000559891 OTOP3Q7RTS5 596 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 PRUNE1Q86TP1 453 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 MFSD6LQ8IWD5 586 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 PRELID2Q8N945 189 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 OSCP1Q8WVF1 389 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 PHF7Q9BWX1 381 aaPredicted RBP11.88□□□□□ -0.51
TM2D3-208ENST00000559891 TXLNGYQ9BZA5 131 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 ZYG11BQ9C0D3 744 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 ACTR5Q9H9F9 607 aaPredicted RBP11.88□□□□□ -0.51
TM2D3-208ENST00000559891 EPS15L1Q9UBC2 864 aa11.88□□□□□ -0.51
TM2D3-208ENST00000559891 ANHXE9PGG2 379 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 PPFIA2O75334 1257 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 TCF3P15923 654 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 GDI1P31150 447 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 KCNJ1P48048 391 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 SOX9P48436 509 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 MNAT1P51948 309 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 EIF3BP55884 814 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 NRG1Q02297 640 aaPredicted RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 FCHO2Q0JRZ9 810 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 DHCR24Q15392 516 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 GAB4Q2WGN9 574 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 C5orf22Q49AR2 442 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 BBS12Q6ZW61 710 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 ZC3H18Q86VM9 953 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 ARHGAP12Q8IWW6 846 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 CARNMT1Q8N4J0 409 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 ACTL9Q8TC94 416 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 IRF7Q92985 503 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 BBS2Q9BXC9 721 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 MAK16Q9BXY0 300 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 RAB17Q9H0T7 212 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 KCNK12Q9HB15 430 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 SPHK2Q9NRA0 654 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 DTLQ9NZJ0 730 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 NYNRINQ9P2P1 1898 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 APOL1O14791 398 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 PSMC3P17980 439 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 GLDCP23378 1020 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 MZF1P28698 734 aaPredicted RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 ACVRL1P37023 503 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 HCAR3P49019 387 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 COPS2P61201 443 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 OTUD4Q01804 1114 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 CXorf57Q6NSI4 855 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 TTC27Q6P3X3 843 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 CCDC121Q6ZUS5 278 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 CCDC13Q8IYE1 715 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 CPXM2Q8N436 756 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 RTL3Q8N8U3 475 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 OR7D4Q8NG98 312 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 ELSPBP1Q96BH3 223 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 TLCD1Q96CP7 247 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 NAP1L3Q99457 506 aaPredicted RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 LGMNQ99538 433 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 CNOT10Q9H9A5 744 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 KIF9Q9HAQ2 790 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 PPARGC1AQ9UBK2 798 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 ZMYM5Q9UJ78 669 aa11.87□□□□□ -0.51
TM2D3-208ENST00000559891 NOVA2Q9UNW9 492 aaKnown RBP11.87□□□□□ -0.51
TM2D3-208ENST00000559891 ARNTLO00327 626 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 RASSF9O75901 435 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 TYRP14679 529 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 OR1E1P30953 314 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 PTPN7P35236 360 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 CHKAP35790 457 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 SLC6A11P48066 632 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 FMO2Q99518 471 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 TMEM248Q9NWD8 314 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
TM2D3-208ENST00000559891 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
TM2D3-208ENST00000559891 RCOR3Q9P2K3 495 aaPredicted RBP11.86□□□□□ -0.51
TM2D3-208ENST00000559891 DNPEPQ9ULA0 475 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 SHROOM3Q8TF72 1996 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 DFFAO00273 331 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 TJP3O95049 919 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 LATS1O95835 1130 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 RHOQP17081 205 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 CD70P32970 193 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 IFNAR2P48551 515 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 MAGOHP61326 146 aaKnown RBP11.86□□□□□ -0.51
TM2D3-208ENST00000559891 KRT71Q3SY84 523 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 DUPD1Q68J44 220 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 APCDD1Q8J025 514 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 SLC44A3Q8N4M1 653 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 GLIS1Q8NBF1 620 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 P3H4Q92791 437 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 MAGOHBQ96A72 148 aaKnown RBP11.86□□□□□ -0.51
TM2D3-208ENST00000559891 CENPTQ96BT3 561 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 ZNF419Q96HQ0 510 aaPredicted RBP11.86□□□□□ -0.51
TM2D3-208ENST00000559891 CEP41Q9BYV8 373 aa11.86□□□□□ -0.51
TM2D3-208ENST00000559891 ECT2Q9H8V3 914 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms