RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NAT16Q8N8M0 369 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 FATE1Q969F0 183 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 XPO6Q96QU8 1125 aaKnown RBP18.48■□□□□ 0.55
CLPX-203ENST00000558958 SPON2Q9BUD6 331 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 ATP13A1Q9HD20 1204 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 ABCB8Q9NUT2 735 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 IGSF9Q9P2J2 1179 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 NEU2Q9Y3R4 380 aa18.48■□□□□ 0.55
CLPX-203ENST00000558958 NYNRINQ9P2P1 1898 aaKnown RBP18.48■□□□□ 0.55
CLPX-203ENST00000558958 FAM187AA6NFU0 413 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 J3KR12 359 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 MTSS1O43312 755 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 KDELR3O43731 214 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 PRAMEF11O60813 436 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 IL10RBQ08334 325 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 KCTD19Q17RG1 926 aaPredicted RBP18.47■□□□□ 0.55
CLPX-203ENST00000558958 TIGD7Q6NT04 549 aaPredicted RBP18.47■□□□□ 0.55
CLPX-203ENST00000558958 SYDE1Q6ZW31 735 aaPredicted RBP18.47■□□□□ 0.55
CLPX-203ENST00000558958 ZNF354CQ86Y25 554 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 GLIS1Q8NBF1 620 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 FERMT1Q9BQL6 677 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 BRD9Q9H8M2 597 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 GTSE1Q9NYZ3 720 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 VPS28Q9UK41 221 aa18.47■□□□□ 0.55
CLPX-203ENST00000558958 KCNK1O00180 336 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 MATN3O15232 486 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 PEX11BO96011 259 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 IFNB1P01574 187 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 CISD3P0C7P0 127 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 NUMBP49757 651 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 CLCN6P51797 869 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 NRLP54845 237 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 WASHC5Q12768 1159 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 PLEKHG6Q3KR16 790 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 ITPRIPL2Q3MIP1 535 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 KIAA0907Q7Z7F0 614 aaPredicted RBP18.46■□□□□ 0.55
CLPX-203ENST00000558958 C12orf40Q86WS4 652 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 APCDD1Q8J025 514 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 SLC44A3Q8N4M1 653 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLPX-203ENST00000558958 CCDC89Q8N998 374 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 DCAF4L2Q8NA75 395 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 SP110Q9HB58 689 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 PDFQ9HBH1 243 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 DNAJC17Q9NVM6 304 aaKnown RBP18.46■□□□□ 0.55
CLPX-203ENST00000558958 GGA2Q9UJY4 613 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 INTS6Q9UL03 887 aaKnown RBP18.46■□□□□ 0.55
CLPX-203ENST00000558958 HPCAL4Q9UM19 191 aa18.46■□□□□ 0.55
CLPX-203ENST00000558958 C5orf60A6NFR6 353 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 LOC730098B7Z3J9 87 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 RNF103O00237 685 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 TRIM24O15164 1050 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 TULP3O75386 442 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 ZMPSTE24O75844 475 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 KRT14P02533 472 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 PABPC1P11940 636 aaKnown RBP18.46■□□□□ 0.54
CLPX-203ENST00000558958 ETS1P14921 441 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 GLDCP23378 1020 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 GJA4P35212 333 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 IFI35P80217 286 aaPredicted RBP18.46■□□□□ 0.54
CLPX-203ENST00000558958 PTK6Q13882 451 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 PPP1R7Q15435 360 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 CCDC70Q6NSX1 233 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 PRUNE1Q86TP1 453 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 MAML1Q92585 1016 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 TRIM51Q9BSJ1 452 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 PCDH9Q9HC56 1237 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 SEPT10Q9P0V9 454 aa18.46■□□□□ 0.54
CLPX-203ENST00000558958 CBX4O00257 560 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 GCATO75600 419 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 STK10O94804 968 aaKnown RBP18.45■□□□□ 0.54
CLPX-203ENST00000558958 RHOXF2BP0C7M4 288 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 ZSCAN5DPP0CG00 497 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 CCNB1P14635 433 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 PTPN3P26045 913 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 DGKGP49619 791 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 SLC7A5Q01650 507 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 ZBTB17Q13105 803 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 HNRNPDQ14103 355 aaKnown RBP18.45■□□□□ 0.54
CLPX-203ENST00000558958 DMC1Q14565 340 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 TRIP13Q15645 432 aaPredicted RBP18.45■□□□□ 0.54
CLPX-203ENST00000558958 P3H1Q32P28 736 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 FUT11Q495W5 492 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 PITRM1Q5JRX3 1037 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 TTC8Q8TAM2 541 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 UBXN4Q92575 508 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 ZNF599Q96NL3 588 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 VAT1Q99536 393 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 IL12RB2Q99665 862 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 RHOXF2Q9BQY4 288 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 C2orf49Q9BVC5 232 aaPredicted RBP18.45■□□□□ 0.54
CLPX-203ENST00000558958 TRPV5Q9NQA5 729 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
CLPX-203ENST00000558958 VPS51Q9UID3 782 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 SLC27A6Q9Y2P4 619 aa18.45■□□□□ 0.54
CLPX-203ENST00000558958 COL6A3P12111 3177 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 A0A0A0MRY4 1105 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 ZSCAN5CA6NGD5 496 aaPredicted RBP18.44■□□□□ 0.54
CLPX-203ENST00000558958 SNAP91O60641 907 aa18.44■□□□□ 0.54
CLPX-203ENST00000558958 HEXIM1O94992 359 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms