RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 RIBC1Q8N443 379 aaPredicted RBP11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 OR7D4Q8NG98 312 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 OR6P1Q8NGX9 317 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 MECRQ9BV79 373 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 MUC3BQ9H195 1237 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 TLR6Q9Y2C9 796 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 COL6A1P12109 1028 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 AVPR1AP37288 418 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 SCAPQ12770 1279 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 CRYMQ14894 314 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 HECTD3Q5T447 861 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF697Q5TEC3 545 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 MARC1Q5VT66 337 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 NECAB2Q7Z6G3 386 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 OXNAD1Q96HP4 312 aaPredicted RBP11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF778Q96MU6 729 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 TACO1Q9BSH4 297 aaKnown RBP11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 MRPL17Q9NRX2 175 aaKnown RBP11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 C2orf78A6NCI8 922 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 HLA-DQB2P05538 268 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 MYL4P12829 197 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 CD68P34810 354 aaPredicted RBP11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 WDR4P57081 412 aaKnown RBP11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 SATB1Q01826 763 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC10A7Q0GE19 358 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 TTC39BQ5VTQ0 682 aaPredicted RBP11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 TXNDC8Q6A555 127 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF534Q76KX8 674 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 CMC1Q7Z7K0 106 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 CNTD1Q8N815 330 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 RTL3Q8N8U3 475 aaKnown RBP11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 DCAKDQ8WVC6 231 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 AGAP2Q99490 1192 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 ENTPD7Q9NQZ7 604 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 SPG21Q9NZD8 308 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 PSAT1Q9Y617 370 aa11.02□□□□□ -0.65
CSPG4P5-201ENST00000558731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 A0A0G2JND7 137 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 EIF4E1BA6NMX2 242 aaKnown RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 MTSS1O43312 755 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 VAPBO95292 243 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 TPSB2P20231 275 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 PAX3P23760 479 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 CYP4F8P98187 520 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 DSC2Q02487 901 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 GALNT2Q10471 571 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 BIRC2Q13490 618 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 TPSAB1Q15661 275 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 NAPEPLDQ6IQ20 393 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 C4orf22Q6V702 233 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 CARNMT1Q8N4J0 409 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 AGR3Q8TD06 166 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 BTN2A3PQ96KV6 586 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 TEKT5Q96M29 485 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 CLSTN3Q9BQT9 956 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 YIPF1Q9Y548 306 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 E7ESA3 106 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 GJB3O75712 270 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 CORO1AP31146 461 aaKnown RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC11A2P49281 568 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SMAD3P84022 425 aaKnown RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZBTB16Q05516 673 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 LINGO4Q6UY18 593 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZCCHC23Q6ZST2 131 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 TPGS1Q6ZTW0 290 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 STRA8Q7Z7C7 330 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 TMEM199Q8N511 208 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 ARL14EPQ8N8R7 260 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 MAB21L3Q8N8X9 362 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 BLOC1S5Q8TDH9 187 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC44A1Q8WWI5 657 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 MIEF2Q96C03 454 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 HDAC11Q96DB2 347 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 PGAP3Q96FM1 320 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 HAPLN3Q96S86 360 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 GBA3Q9H227 469 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 CAB39LQ9H9S4 337 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 ACSS2Q9NR19 701 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 PCDHB12Q9Y5F1 795 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 A0A0D9SEW6 157 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 FGF10O15520 208 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SPAG6O75602 509 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 FSBPO95073 299 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 PRKCGP05129 697 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 DRD4P21917 467 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SCNN1BP51168 640 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SEMA3BQ13214 749 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 PLPP4Q5VZY2 271 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 CYB5D1Q6P9G0 228 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 RYBPQ8N488 228 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 RTP4Q96DX8 246 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 MLPHQ9BV36 600 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 FRMD8Q9BZ67 464 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SMG9Q9H0W8 520 aaKnown RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 OSBPL2Q9H1P3 480 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 LRRC40Q9H9A6 602 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms