RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 IL17RCQ8NAC3 791 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 C1orf54Q8WWF1 131 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 CAMK1GQ96NX5 476 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 KCNK16Q96T55 309 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 TRIM51Q9BSJ1 452 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 DCLK3Q9C098 648 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 LRRC19Q9H756 370 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 CNGB3Q9NQW8 809 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 TMEM30AQ9NV96 361 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 ZNF446Q9NWS9 450 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 PCYOX1Q9UHG3 505 aa13.91□□□□□ -0.18
TMED3-205ENST00000558562 UTP11Q9Y3A2 253 aaKnown RBP13.91□□□□□ -0.18
TMED3-205ENST00000558562 TCRBV21S2A2A0A5A6 115 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 ESYT3A0FGR9 886 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 C3orf70A6NLC5 250 aaPredicted RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 UPK3BL1B0FP48 263 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 BHMG1C9JSJ3 638 aaPredicted RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 UPK3BL2E5RIL1 263 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 H0Y626 953 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 LEFTY2O00292 366 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 TRIM16O95361 564 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 CYP17A1P05093 508 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 MYBL2P10244 700 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 CHRM1P11229 460 aaPredicted RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 KRT10P13645 584 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 KDELR1P24390 212 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 RDXP35241 583 aaKnown RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 MATKP42679 507 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 PTGIRP43119 386 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 TNNT3P45378 269 aaPredicted RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 CUL1Q13616 776 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 RAB6CQ53S08 254 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 KCNT1Q5JUK3 1230 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 CYP4V2Q6ZWL3 525 aaPredicted RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 RAB44Q7Z6P3 723 aaPredicted RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 C12orf40Q86WS4 652 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 DEFB106AQ8N104 65 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 KCTD6Q8NC69 237 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 TEKT4Q8WW24 435 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 IFT81Q8WYA0 676 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 ATG4AQ8WYN0 398 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 NDRG1Q92597 394 aaKnown RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 SLC2A13Q96QE2 648 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 TBCBQ99426 244 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 RAB6CQ9H0N0 254 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 PNPLA8Q9NP80 782 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 HOMER3Q9NSC5 361 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 STAP1Q9ULZ2 295 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 SLC6A14Q9UN76 642 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
TMED3-205ENST00000558562 R3HDM2Q9Y2K5 976 aaKnown RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 HELZP42694 1942 aaKnown RBP13.9□□□□□ -0.18
TMED3-205ENST00000558562 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 FLNBO75369 2602 aaKnown RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 FAM221BA6H8Z2 402 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 ATP8B1O43520 1251 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 OPHN1O60890 802 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 ADAM23O75077 832 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 KAT7O95251 611 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 ECEL1O95672 775 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 ZBED1O96006 694 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 TFE3P19532 575 aaPredicted RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 NOS2P35228 1153 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 CARSP49589 748 aaKnown RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 CDH6P55285 790 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 HDAC4P56524 1084 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 YWHAZP63104 245 aaKnown RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 KDSRQ06136 332 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 SNX1Q13596 522 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 KRT81Q14533 505 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 TAZQ16635 292 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 BOLA3Q53S33 107 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 STRADAQ7RTN6 431 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 RFX6Q8HWS3 928 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 MINDY1Q8N5J2 469 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 PNPLA1Q8N8W4 532 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 AENQ8WTP8 325 aaKnown RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 IRGQQ8WZA9 623 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 CENPIQ92674 756 aaPredicted RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 SNRNP25Q9BV90 132 aaKnown RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 DPH5Q9H2P9 285 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 POPDC2Q9HBU9 364 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 POLMQ9NP87 494 aaPredicted RBP13.89□□□□□ -0.19
TMED3-205ENST00000558562 FAM114A2Q9NRY5 505 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.89□□□□□ -0.19
TMED3-205ENST00000558562 SMPD4Q9NXE4 827 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 EFR3BQ9Y2G0 817 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 CEP192Q8TEP8 1941 aa13.89□□□□□ -0.19
TMED3-205ENST00000558562 BPTFQ12830 3046 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 MDM4O15151 490 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 LTFP02788 710 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 SERPINF2P08697 491 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 CD59P13987 128 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 GRIK1P39086 918 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 KCNJ1P48048 391 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 USP46P62068 366 aa13.88□□□□□ -0.19
TMED3-205ENST00000558562 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
TMED3-205ENST00000558562 HLTFQ14527 1009 aaKnown RBP eCLIP13.88□□□□□ -0.19
TMED3-205ENST00000558562 PDK2Q15119 407 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms