RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 COL11A1P12107 1806 aaPredicted RBP6.61□□□□□ -1.35
RTF1-204ENST00000558117 DLG5Q8TDM6 1919 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 ASXL3Q9C0F0 2248 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 ASTN1O14525 1302 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 KPNA5O15131 536 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 KINO60870 393 aaKnown RBP6.6□□□□□ -1.35
RTF1-204ENST00000558117 GLP2RO95838 553 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 MYL3P08590 195 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 SUPT20HL2P0C7V6 817 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 TXNP10599 105 aaKnown RBP6.6□□□□□ -1.35
RTF1-204ENST00000558117 RPL17P18621 184 aaKnown RBP6.6□□□□□ -1.35
RTF1-204ENST00000558117 PCSK6P29122 969 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 CCT8P50990 548 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 PDE6CP51160 858 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 PRKAG1P54619 331 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 SRSF1Q07955 248 aaKnown RBP eCLIP6.6□□□□□ -1.35
RTF1-204ENST00000558117 NPY5RQ15761 445 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 SYCE2Q6PIF2 218 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 ZNF384Q8TF68 577 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 GLG1Q92896 1179 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 PLEKHF1Q96S99 279 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 STRBPQ96SI9 672 aaKnown RBP6.6□□□□□ -1.35
RTF1-204ENST00000558117 TIMP4Q99727 224 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 PCGF6Q9BYE7 350 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 LMAN2LQ9H0V9 348 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 ARNT2Q9HBZ2 717 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 MID2Q9UJV3 735 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 ZHX1Q9UKY1 873 aaPredicted RBP6.6□□□□□ -1.35
RTF1-204ENST00000558117 CDY1Q9Y6F8 540 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 FREM2Q5SZK8 3169 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 ATAD5Q96QE3 1844 aa6.6□□□□□ -1.35
RTF1-204ENST00000558117 NOTCH2Q04721 2471 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 A1L4Q6 167 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 CHL1O00533 1208 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 MT-ND5P03915 603 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 FESP07332 822 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 PLA2G2AP14555 144 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 WT1P19544 449 aaPredicted RBP6.59□□□□□ -1.35
RTF1-204ENST00000558117 BTF3P20290 206 aaKnown RBP6.59□□□□□ -1.35
RTF1-204ENST00000558117 ITGA8P53708 1063 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 ZNF543Q08ER8 600 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 CAVIN4Q5BKX8 364 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 FAM98AQ8NCA5 519 aaKnown RBP6.59□□□□□ -1.35
RTF1-204ENST00000558117 SARAFQ96BY9 339 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 SNX22Q96L94 193 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 PPP1R9BQ96SB3 815 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 UNKQ9C0B0 810 aaKnown RBP6.59□□□□□ -1.35
RTF1-204ENST00000558117 SERTAD4Q9NUC0 356 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 HERC5Q9UII4 1024 aaKnown RBP6.59□□□□□ -1.35
RTF1-204ENST00000558117 BARX2Q9UMQ3 279 aaPredicted RBP6.59□□□□□ -1.35
RTF1-204ENST00000558117 SNX14Q9Y5W7 946 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 WNT6Q9Y6F9 365 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.59□□□□□ -1.35
RTF1-204ENST00000558117 MYO10Q9HD67 2058 aa6.59□□□□□ -1.35
RTF1-204ENST00000558117 ATG2AQ2TAZ0 1938 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 LOC102723971A0A1B0GUV8 181 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 ABHD14A-ACY1A0A1B0GW23 586 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 C5orf67F2Z3F1 127 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 RAB27BO00194 218 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 PROP1O75360 226 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 VNN1O95497 513 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 ONECUT2O95948 504 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 CXCL10P02778 98 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 KRT18P05783 430 aaKnown RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 IL6RP08887 468 aaPredicted RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 PTDSS1P48651 473 aaKnown RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 CARSP49589 748 aaKnown RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 PRIM2P49643 509 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 CASP5P51878 434 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 RHBDL3P58872 404 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 ACVR2BQ13705 512 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 CAMK1Q14012 370 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 DAG1Q14118 895 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 ARHGEF7Q14155 803 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 INSCQ1MX18 579 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 KLHDC7AQ5VTJ3 777 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 CACHD1Q5VU97 1274 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 FCRL6Q6DN72 434 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 AMIGO2Q86SJ2 522 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 LIX1LQ8IVB5 337 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 DNAJB14Q8TBM8 379 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 MAP4K1Q92918 833 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 SECISBP2LQ93073 1101 aaKnown RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 R3HDM4Q96D70 268 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 CFAP53Q96M91 514 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 PUS3Q9BZE2 481 aaKnown RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 RPAP3Q9H6T3 665 aaPredicted RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 DNAJC18Q9H819 358 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 TBC1D23Q9NUY8 699 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 ARPP21Q9UBL0 812 aaPredicted RBP6.58□□□□□ -1.36
RTF1-204ENST00000558117 SH2B3Q9UQQ2 575 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 CACNA1IQ9P0X4 2223 aa6.58□□□□□ -1.36
RTF1-204ENST00000558117 PI4KAP2A4QPH2 592 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 EIF4E1BA6NMX2 242 aaKnown RBP6.57□□□□□ -1.36
RTF1-204ENST00000558117 MASP2O00187 686 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 QSOX1O00391 747 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 IL18RAPO95256 599 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 RASAL1O95294 804 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms