RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TRAT1Q6PIZ9 186 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 MPZL3Q6UWV2 235 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 PARS2Q7L3T8 475 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 PIWIL3Q7Z3Z3 882 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 ZNF804AQ7Z570 1209 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 PLEKHH3Q7Z736 793 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CAND1Q86VP6 1230 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 ZSWIM9Q86XI8 627 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 TXNDC5Q8NBS9 432 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 ADPRHL1Q8NDY3 354 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 BEND2Q8NDZ0 799 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 SRFBP1Q8NEF9 429 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 OR56A1Q8NGH5 318 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 MRPS27Q92552 414 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 PTP4A1Q93096 173 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 GTF3C6Q969F1 213 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 ZNF775Q96BV0 537 aaPredicted RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 CCDC114Q96M63 670 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 FER1L6-AS2Q96M78 137 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CFAP57Q96MR6 1250 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 DGAT2Q96PD7 388 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 TSPAN18Q96SJ8 248 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CINPQ9BW66 212 aaPredicted RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 ANKRD2Q9GZV1 360 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 ABCG4Q9H172 646 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 OSGEPL1Q9H4B0 414 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CDCP1Q9H5V8 836 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 SLC22A11Q9NSA0 550 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 C20orf141Q9NUB4 165 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 TBCCD1Q9NVR7 557 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 MTMR4Q9NYA4 1195 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 COQ3Q9NZJ6 369 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 DLGAP2Q9P1A6 1054 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 HECAQ9UBI9 543 aaPredicted RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 HSPB7Q9UBY9 170 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 FBXL17Q9UF56 701 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 AMACRQ9UHK6 382 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 ANAPC2Q9UJX6 822 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 INTS6Q9UL03 887 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 NENFQ9UMX5 172 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 AGTPBP1Q9UPW5 1226 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 KLHL20Q9Y2M5 609 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 MYOCOSA0A1B0GUC4 107 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 A0A1W2PQF6 199 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 TCRBV21S2A2A0A5A6 115 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 GRXCR1A8MXD5 290 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 DIRC3C9JPN6 131 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 HS6ST1O60243 411 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 CDC14BO60729 498 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 HMMRO75330 724 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 NDUFS3O75489 264 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 SLC22A3O75751 556 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 PSMD10O75832 226 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 VNN1O95497 513 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 FYNP06241 537 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 INHBBP09529 407 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 KRT10P13645 584 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 PKMP14618 531 aaKnown RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 TMEM11P17152 192 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 PRPH2P23942 346 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 GSTM2P28161 218 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 HOXA13P31271 388 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 HPDP32754 393 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 GJC1P36383 396 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 LIPAP38571 399 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 CD97P48960 835 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 AMPHP49418 695 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 PMS2P54278 862 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 OAZ1P54368 228 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 EVCP57679 992 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 SUMO2P61956 95 aaKnown RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 MRPS35P82673 323 aaKnown RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 INSM1Q01101 510 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 DNASE1L3Q13609 305 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 ALCAMQ13740 583 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 IL13RA2Q14627 380 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 ELAVL1Q15717 326 aaKnown RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 SMU1Q2TAY7 513 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 FAM102AQ5T9C2 384 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 KIAA0930Q6ICG6 404 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 JADE1Q6IE81 842 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 RAB12Q6IQ22 244 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 TSSK4Q6SA08 328 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 GLDNQ6ZMI3 551 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 UBE2Q1Q7Z7E8 422 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 GLRX5Q86SX6 157 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 ATG4DQ86TL0 474 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 KBTBD6Q86V97 674 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 ELOA2Q8IYF1 753 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 VPS52Q8N1B4 723 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 GHDCQ8N2G8 530 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 ZNF619Q8N2I2 560 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 CPXM2Q8N436 756 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 MINDY1Q8N5J2 469 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 MB21D1Q8N884 522 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 MCUQ8NE86 351 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 MDGA1Q8NFP4 955 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 MAFAQ8NHW3 353 aaPredicted RBP3.98□□□□□ -1.77
TDP1-217ENST00000557782 SOCS4Q8WXH5 440 aa3.98□□□□□ -1.77
TDP1-217ENST00000557782 HSPH1Q92598 858 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms