RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 BNIP3LO60238 219 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 RAMP2O60895 175 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 LRIG2O94898 1065 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 SEMA4FO95754 770 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 IL1BP01584 269 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 GYPCP04921 128 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 SYPP08247 313 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 C5AR1P21730 350 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 TGM1P22735 817 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 ITPKAP23677 461 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 EPHB2P29323 1055 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 PTGER3P43115 390 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 STK19P49842 368 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF135P52742 658 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-206ENST00000557358 GNA12Q03113 381 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 GFPT1Q06210 699 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-206ENST00000557358 ACAP1Q15027 740 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 SF3A2Q15428 464 aaKnown RBP14.15□□□□□ -0.14
VPS33B-206ENST00000557358 DLG2Q15700 870 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 CST6Q15828 149 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 PPP1R15BQ5SWA1 713 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 C9orf64Q5T6V5 341 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 DGLUCYQ7Z3D6 616 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF683Q8IZ20 524 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 CCDC185Q8N715 623 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 SNX19Q92543 992 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 MYO19Q96H55 970 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 EDEM2Q9BV94 578 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 TRIM5Q9C035 493 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 ISCUQ9H1K1 167 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 MAGEH1Q9H213 219 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 PABPC3Q9H361 631 aaKnown RBP14.15□□□□□ -0.14
VPS33B-206ENST00000557358 DYRK4Q9NR20 520 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 FBXL12Q9NXK8 326 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 VPS51Q9UID3 782 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 PILRBQ9UKJ0 227 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 TPX2Q9ULW0 747 aaKnown RBP14.15□□□□□ -0.14
VPS33B-206ENST00000557358 HS3ST2Q9Y278 367 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 WDR87Q6ZQQ6 2873 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 ZSCAN5CA6NGD5 496 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-206ENST00000557358 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-206ENST00000557358 RNASEH2AO75792 299 aaKnown RBP14.14□□□□□ -0.15
VPS33B-206ENST00000557358 SLC8A1P32418 973 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 PSMD8P48556 350 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 NUMBP49757 651 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 IRAK1P51617 712 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 LIMK1P53667 647 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 TPI1P60174 286 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 PIGHQ14442 188 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-206ENST00000557358 POLD3Q15054 466 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-206ENST00000557358 CCDC122Q5T0U0 273 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 E4F1Q66K89 784 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-206ENST00000557358 ALKBH5Q6P6C2 394 aaKnown RBP14.14□□□□□ -0.15
VPS33B-206ENST00000557358 CNGA4Q8IV77 575 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 STK40Q8N2I9 435 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 SH2D3CQ8N5H7 860 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 ALG14Q96F25 216 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 MIR1-1HGQ9H1L0 117 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 TMEM248Q9NWD8 314 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 DNAI1Q9UI46 699 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 LCMT1Q9UIC8 334 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 FZD10Q9ULW2 581 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 SLC6A14Q9UN76 642 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 OR51B4Q9Y5P0 310 aa14.14□□□□□ -0.15
VPS33B-206ENST00000557358 CEP250Q9BV73 2442 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 FRYLO94915 3013 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 SPTBN4Q9H254 2564 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 CXorf51AA0A1B0GTR3 108 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 METTL12A8MUP2 240 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 I6L893 689 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-206ENST00000557358 MYO1FO00160 1098 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 SLC30A4O14863 429 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 MID1O15344 667 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 AKR1B10O60218 316 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 PRNPP04156 253 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 SERPINF2P08697 491 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 GOT1P17174 413 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 DNA2P51530 1060 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 ERMARDQ5T6L9 678 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 DCAF12L1Q5VU92 463 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 HGSNATQ68CP4 663 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 SLC23A3Q6PIS1 610 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 ERMP1Q7Z2K6 904 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 PSTKQ8IV42 348 aaKnown RBP14.13□□□□□ -0.15
VPS33B-206ENST00000557358 VSTM4Q8IW00 320 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 HDDC3Q8N4P3 179 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 RTL3Q8N8U3 475 aaKnown RBP14.13□□□□□ -0.15
VPS33B-206ENST00000557358 CTNNBL1Q8WYA6 563 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-206ENST00000557358 PTPRN2Q92932 1015 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 SKA1Q96BD8 255 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 RMDN1Q96DB5 314 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 PPP1R16AQ96I34 528 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 CEP44Q9C0F1 390 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 SMOC1Q9H4F8 434 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 MTG2Q9H4K7 406 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 DHX35Q9H5Z1 703 aaKnown RBP14.13□□□□□ -0.15
VPS33B-206ENST00000557358 TMEM9BQ9NQ34 198 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms