RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 YKT6O15498 198 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 PLRG1O43660 514 aaKnown RBP16.31■□□□□ 0.2
TUBB3-213ENST00000557262 CNTN5O94779 1100 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 CYP11B1P15538 503 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 TFE3P19532 575 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-213ENST00000557262 NUDT1P36639 197 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 SCNN1AP37088 669 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-213ENST00000557262 SULT1E1P49888 294 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 PPP2CBP62714 309 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 PPP2CAP67775 309 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 DEUP1Q05D60 604 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 CNTN1Q12860 1018 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 SHBQ15464 509 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 ACBD5Q5T8D3 534 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-213ENST00000557262 KLHDC7AQ5VTJ3 777 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 OTUD1Q5VV17 481 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-213ENST00000557262 NAPEPLDQ6IQ20 393 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 LRRC31Q6UY01 552 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 MFSD2AQ8NA29 543 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 PIP4K2CQ8TBX8 421 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 SAP25Q8TEE9 199 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 C1orf74Q96LT6 269 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 ERVMER34-1Q9H9K5 563 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 LHX6Q9UPM6 363 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 DMTF1Q9Y222 760 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 HS3ST2Q9Y278 367 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 FARP1Q9Y4F1 1045 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-213ENST00000557262 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 PLXNA2O75051 1894 aa16.31■□□□□ 0.2
TUBB3-213ENST00000557262 PTPRBP23467 1997 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 BNIP3LO60238 219 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 MAGEC1O60732 1142 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 LDOC1O95751 146 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-213ENST00000557262 SRCP12931 536 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 NXPH1P58417 271 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 STAT4Q14765 748 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 SMAD1Q15797 465 aaKnown RBP16.3■□□□□ 0.2
TUBB3-213ENST00000557262 DPCR1Q3MIW9 517 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 SLC25A52Q3SY17 297 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 ALFQ53S48 1182 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 CCDC157Q569K6 752 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 HSP90AA4PQ58FG1 418 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 Q6ZVU0 165 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 SETD3Q86TU7 594 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-213ENST00000557262 TRIM69Q86WT6 500 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 ZNF683Q8IZ20 524 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 MDM1Q8TC05 714 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 C2orf49Q9BVC5 232 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-213ENST00000557262 ANLNQ9NQW6 1124 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 ZFYVE26Q68DK2 2539 aa16.3■□□□□ 0.2
TUBB3-213ENST00000557262 TRABD2BA6NFA1 517 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 I6L893 689 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-213ENST00000557262 PES1O00541 588 aaKnown RBP16.29■□□□□ 0.2
TUBB3-213ENST00000557262 ENC1O14682 589 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 MT-CO1P00395 513 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 RHOCP08134 193 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 MAT2AP31153 395 aaKnown RBP16.29■□□□□ 0.2
TUBB3-213ENST00000557262 RXRGP48443 463 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 CCDC15Q0P6D6 951 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 OVGP1Q12889 678 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 POM121L1PQ3SYA9 428 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-213ENST00000557262 AGBL4Q5VU57 503 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 IQCHQ86VS3 1027 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 XYLT1Q86Y38 959 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 MARCH9Q86YJ5 346 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 OXR1Q8N573 874 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 ATP11CQ8NB49 1132 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 TBCBQ99426 244 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 PSMB7Q99436 277 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 NAA15Q9BXJ9 866 aaKnown RBP16.29■□□□□ 0.2
TUBB3-213ENST00000557262 DKK4Q9UBT3 224 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 PCDHGA1Q9Y5H4 931 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 FHOD1Q9Y613 1164 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 CACNA1GO43497 2377 aa16.29■□□□□ 0.2
TUBB3-213ENST00000557262 ANKRD11Q6UB99 2663 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-213ENST00000557262 PRAMEF26H0Y7S4 382 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 SNAP91O60641 907 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 C1SP09871 688 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 CDK4P11802 303 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 UCHL3P15374 230 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 EPHA8P29322 1005 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-213ENST00000557262 CHRNA3P32297 505 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 BNIP3Q12983 259 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 CAMK2BQ13554 666 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 SETMARQ53H47 684 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-213ENST00000557262 CT47A1Q5JQC4 288 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-213ENST00000557262 TAF3Q5VWG9 929 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 NEK5Q6P3R8 708 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 DHRS13Q6UX07 377 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 TMPRSS12Q86WS5 348 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 SPATS2Q86XZ4 545 aaKnown RBP16.28■□□□□ 0.2
TUBB3-213ENST00000557262 EID2Q8N6I1 236 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 MSANTD4Q8NCY6 345 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 TMIEQ8NEW7 156 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 OR2A12Q8NGT7 310 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms