RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 PPM1HQ9ULR3 514 aa11.73□□□□□ -0.53
CCDC85C-205ENST00000556348 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
CCDC85C-205ENST00000556348 KALRNO60229 2985 aa11.73□□□□□ -0.53
CCDC85C-205ENST00000556348 COL6A6A6NMZ7 2263 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 A0A1W2PQU0 124 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 RNF225M0QZC1 329 aaPredicted RBP11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 MCF2LO15068 1137 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 SLC28A2O43868 658 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 PIAS2O75928 621 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 CALCAP01258 141 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 PLK1P53350 603 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 DLG2Q15700 870 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 RABGAP1LQ5R372 815 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 KRBA2Q6ZNG9 492 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 Q6ZVU0 165 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 FAM131CQ96AQ9 280 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 VCPIP1Q96JH7 1222 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 SEMA4CQ9C0C4 833 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 FZD3Q9NPG1 666 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 DYRK4Q9NR20 520 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 DNAJC28Q9NX36 388 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 NLGN3Q9NZ94 848 aa11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 ARMCX3Q9UH62 379 aaPredicted RBP11.72□□□□□ -0.53
CCDC85C-205ENST00000556348 SYNJ2BP-COX16A0A087WUM0 186 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 TCAF2A6NFQ2 919 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 KCNU1A8MYU2 1149 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 ALOX15BO15296 676 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 ATP9BO43861 1147 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 PCDH8O95206 1070 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 TRUB2O95900 331 aaKnown RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 GP1BAP07359 652 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 ACADSBP45954 432 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 ZNF177Q13360 481 aaPredicted RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 ZNF542PQ5EBM4 170 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 C3orf38Q5JPI3 329 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 TTC39BQ5VTQ0 682 aaPredicted RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 NEK5Q6P3R8 708 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 HORMAD1Q86X24 394 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 TMEM145Q8NBT3 493 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 OR13H1Q8NG92 308 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 IFI44Q8TCB0 444 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 CCDC97Q96F63 343 aaPredicted RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 MED8Q96G25 268 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 RPRD1AQ96P16 312 aaPredicted RBP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 FEM1AQ9BSK4 669 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 FAM204AQ9H8W3 233 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 USP29Q9HBJ7 922 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■■■■□ 21
CCDC85C-205ENST00000556348 COX16Q9P0S2 106 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 VPS28Q9UK41 221 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 SATB2Q9UPW6 733 aa11.71□□□□□ -0.53
CCDC85C-205ENST00000556348 CPED1A4D0V7 1026 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 CYSRT1A8MQ03 144 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 K7ESM1 405 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 SCAMP1O15126 338 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 ARHGAP6O43182 974 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 NEBLO76041 1014 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 SLC2A3P11169 496 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 HNRNPA2B1P22626 353 aaKnown RBP11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 PRCPP42785 496 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 FMO5P49326 533 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 CLDN2P57739 230 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 TAS2R38P59533 333 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.547e-7■■■■□ 23.8
CCDC85C-205ENST00000556348 YWHAZP63104 245 aaKnown RBP11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 CETN1Q12798 172 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 ISXQ2M1V0 245 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 PIP5KL1Q5T9C9 394 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 ANKRD40Q6AI12 368 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 FOXR1Q6PIV2 292 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 Q6ZSR6 202 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 BEND5Q7L4P6 421 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 RRAGAQ7L523 313 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 PTAR1Q7Z6K3 402 aaPredicted RBP11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 TTC9Q92623 222 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 KAT5Q92993 513 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 SLC35C1Q96A29 364 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 MED15Q96RN5 788 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 MUC3BQ9H195 1237 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 POPDC2Q9HBU9 364 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 ASCL3Q9NQ33 180 aa11.7□□□□□ -0.54
CCDC85C-205ENST00000556348 FAM237AA0A1B0GTK4 181 aa11.69□□□□□ -0.54
CCDC85C-205ENST00000556348 A0A1W2PQ27 194 aa11.69□□□□□ -0.54
CCDC85C-205ENST00000556348 A0A1W2PQ64 194 aa11.69□□□□□ -0.54
CCDC85C-205ENST00000556348 ZNF202O95125 648 aa11.69□□□□□ -0.54
CCDC85C-205ENST00000556348 WISP1O95388 367 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms