RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 SIK2Q9H0K1 926 aa13.66□□□□□ -0.22
TGFB3-204ENST00000556285 PIGVQ9NUD9 493 aa13.66□□□□□ -0.22
TGFB3-204ENST00000556285 CA5BQ9Y2D0 317 aa13.66□□□□□ -0.22
TGFB3-204ENST00000556285 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.65□□□□□ -0.22
TGFB3-204ENST00000556285 GTPBP10A4D1E9 387 aaKnown RBP13.65□□□□□ -0.22
TGFB3-204ENST00000556285 K7ERQ8 282 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 TLR4O00206 839 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 BNIP3LO60238 219 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 DFNA5O60443 496 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 SNAP91O60641 907 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 NNMTP40261 264 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 NXPH1P58417 271 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 TAS2R38P59533 333 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
TGFB3-204ENST00000556285 PTK2Q05397 1052 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 SULT2A1Q06520 285 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 ZNF177Q13360 481 aaPredicted RBP13.65□□□□□ -0.22
TGFB3-204ENST00000556285 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
TGFB3-204ENST00000556285 ALFQ53S48 1182 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 C2CD6Q53TS8 623 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 ARTNQ5T4W7 220 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 AGBL4Q5VU57 503 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 SLC26A9Q7LBE3 791 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 ZNF683Q8IZ20 524 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 EID2Q8N6I1 236 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 OR8D1Q8WZ84 308 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 FAM81BQ96LP2 452 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 NPY6RQ99463 290 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 VPS28Q9UK41 221 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 PPM1HQ9ULR3 514 aa13.65□□□□□ -0.22
TGFB3-204ENST00000556285 GCN1Q92616 2671 aaKnown RBP13.64□□□□□ -0.23
TGFB3-204ENST00000556285 ENC1O14682 589 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 PLRG1O43660 514 aaKnown RBP13.64□□□□□ -0.23
TGFB3-204ENST00000556285 LDOC1O95751 146 aaPredicted RBP13.64□□□□□ -0.23
TGFB3-204ENST00000556285 ITGAVP06756 1048 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 CTSLP07711 333 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 SRCP12931 536 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 EPHA8P29322 1005 aaPredicted RBP13.64□□□□□ -0.23
TGFB3-204ENST00000556285 NOS2P35228 1153 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 KRT9P35527 623 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 MIIPQ5JXC2 388 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 NAPEPLDQ6IQ20 393 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 TRNP1Q6NT89 227 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 FAM71AQ8IYT1 594 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 SH2D3CQ8N5H7 860 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 ZNF397Q8NF99 534 aaPredicted RBP13.64□□□□□ -0.23
TGFB3-204ENST00000556285 PIP4K2CQ8TBX8 421 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 CNDP2Q96KP4 475 aaKnown RBP13.64□□□□□ -0.23
TGFB3-204ENST00000556285 TBCBQ99426 244 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 GDF3Q9NR23 364 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 ARHGEF38Q9NXL2 777 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 DKK4Q9UBT3 224 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 SLC25A13Q9UJS0 675 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 TBC1D30Q9Y2I9 924 aa13.64□□□□□ -0.23
TGFB3-204ENST00000556285 MCF2LO15068 1137 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 SMAD6O43541 496 aaKnown RBP13.63□□□□□ -0.23
TGFB3-204ENST00000556285 TLX3O43711 291 aaPredicted RBP13.63□□□□□ -0.23
TGFB3-204ENST00000556285 CLDN11O75508 207 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 ZIC2O95409 532 aaPredicted RBP13.63□□□□□ -0.23
TGFB3-204ENST00000556285 ZNF18P17022 549 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 GLDCP23378 1020 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 ITPKBP27987 946 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 CXCR3P49682 368 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 SULT1E1P49888 294 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 OXCT1P55809 520 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 UBE2HP62256 183 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 KCNMA1Q12791 1236 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 DPCR1Q3MIW9 517 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 LINGO4Q6UY18 593 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 MLKLQ8NB16 471 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 KLK6Q92876 244 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 ARRDC3Q96B67 414 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 SKA1Q96BD8 255 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 MYOCQ99972 504 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 TKTL2Q9H0I9 626 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 MUC3BQ9H195 1237 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 WDCPQ9H6R7 721 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.63□□□□□ -0.23
TGFB3-204ENST00000556285 MPP6Q9NZW5 540 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 VPS51Q9UID3 782 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 KNTC1P50748 2209 aa13.63□□□□□ -0.23
TGFB3-204ENST00000556285 DOCK4Q8N1I0 1966 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 A0A0D9SEW6 157 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 SLC7A4O43246 635 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 SDC3O75056 442 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 PRB1P04280 392 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 RRM1P23921 792 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 ACADVLP49748 655 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 CDH4P55283 916 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 RAPGEF1Q13905 1077 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 DRAP1Q14919 205 aaPredicted RBP13.62□□□□□ -0.23
TGFB3-204ENST00000556285 MAN2A1Q16706 1144 aa13.62□□□□□ -0.23
TGFB3-204ENST00000556285 TPD52L1Q16890 204 aaPredicted RBP13.62□□□□□ -0.23
TGFB3-204ENST00000556285 INAVAQ3KP66 663 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms