RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CEP76Q8TAP6 659 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 OVCA2Q8WZ82 227 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 NUSAP1Q9BXS6 441 aaKnown RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 B3GNT5Q9BYG0 378 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 XYLT2Q9H1B5 865 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 CD248Q9HCU0 757 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 GCM1Q9NP62 436 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 ARHGEF4Q9NR80 690 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 SMPD4Q9NXE4 827 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 CFAP97Q9P2B7 532 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 CHORDC1Q9UHD1 332 aaPredicted RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 FASNP49327 2511 aaKnown RBP9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 WDFY3Q8IZQ1 3526 aa9.47□□□□□ -0.89
GTF2A1-204ENST00000556268 PKD1L2Q7Z442 2459 aa9.46□□□□□ -0.89
GTF2A1-204ENST00000556268 MYOFQ9NZM1 2061 aa9.46□□□□□ -0.89
GTF2A1-204ENST00000556268 A0A1W2PQ27 194 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 A0A1W2PQ64 194 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 A0A1W2PQC6 194 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 A0A1W2PQD8 194 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 A0A1W2PQF6 199 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 HOXC11O43248 304 aaPredicted RBP9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 MPOP05164 745 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 ENGP17813 658 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 ANXA13P27216 316 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 VIPR1P32241 457 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 ETFBP38117 255 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 SNRPFP62306 86 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 YBX1P67809 324 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 GAD2Q05329 585 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 RESTQ13127 1097 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 NCAPHQ15003 741 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 PSMD6Q15008 389 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 UAP1L1Q3KQV9 507 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 MDH1BQ5I0G3 518 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 LY6G5CQ5SRR4 150 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 HECTD3Q5T447 861 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 LRSAM1Q6UWE0 723 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 CCDC65Q8IXS2 484 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 SLITRK1Q96PX8 696 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 MMS19Q96T76 1030 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 ZNF518BQ9C0D4 1074 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 ELOVL4Q9GZR5 314 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 SNX25Q9H3E2 840 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 SLC32A1Q9H598 525 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 COMMD8Q9NX08 183 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 HSPBP1Q9NZL4 362 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 KLHL14Q9P2G3 628 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 R3HCC1Q9Y3T6 440 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 MYO16Q9Y6X6 1858 aa9.46□□□□□ -0.9
GTF2A1-204ENST00000556268 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 LAMA5O15230 3695 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 TBC1D3BA6NDS4 549 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 NUDT19A8MXV4 375 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 B2RBV5 119 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 H0Y626 953 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 TAF4O00268 1085 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 CLDN5O00501 218 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 EIF3DO15371 548 aaKnown RBP eCLIP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 COCHO43405 550 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 TULP3O75386 442 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 RTN3O95197 1032 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 TRIM16O95361 564 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 SERPINF2P08697 491 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 MBL2P11226 248 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 CD59P13987 128 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 GABRG2P18507 467 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 PDCP20941 246 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 ATICP31939 592 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 TUBP50607 506 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 LINC00310P59036 64 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 SNRNP35Q16560 246 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 DUOXA1Q1HG43 343 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 WDR72Q3MJ13 1102 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 PREPLQ4J6C6 727 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 FAM173BQ6P4H8 233 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 C6orf15Q6UXA7 325 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 SLC36A4Q6YBV0 504 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 HTR3DQ70Z44 454 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 TMEM25Q86YD3 366 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 B3GALNT2Q8NCR0 500 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 OR6B3Q8NGW1 331 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 HMGB4Q8WW32 186 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 HPS3Q969F9 1004 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 WBP2Q969T9 261 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 ZNF419Q96HQ0 510 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 KCNK16Q96T55 309 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 DPEP3Q9H4B8 488 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 IGSF5Q9NSI5 407 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 DEC1Q9P2X7 70 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 KIAA1549LQ6ZVL6 1849 aa9.45□□□□□ -0.9
GTF2A1-204ENST00000556268 A8MXQ7 604 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 GJB3O75712 270 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 SYT1P21579 422 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 NTSR1P30989 418 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 STAT6P42226 847 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 PGFP49763 221 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 ZNF143P52747 638 aaPredicted RBP9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 FAM193AP78312 1265 aa9.44□□□□□ -0.9
GTF2A1-204ENST00000556268 ARID5AQ03989 594 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms