RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 PRAMEF26H0Y7S4 382 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 RIOK3O14730 519 aaKnown RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 LDOC1O95751 146 aaPredicted RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 LSM8O95777 96 aaKnown RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 ERBB2P04626 1255 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 WNT1P04628 370 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 ITGAVP06756 1048 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 CYP11B1P15538 503 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 EEF1GP26641 437 aaKnown RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 NXPH1P58417 271 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 NRG1Q02297 640 aaPredicted RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 NME3Q13232 169 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 CAMK2BQ13554 666 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 DRAP1Q14919 205 aaPredicted RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 ACCSLQ4AC99 568 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 PTPN20Q4JDL3 420 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 SETMARQ53H47 684 aaPredicted RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 KCNT1Q5JUK3 1230 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 KLHDC7AQ5VTJ3 777 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 RETSATQ6NUM9 610 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 CLEC17AQ6ZS10 378 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 SLC47A2Q86VL8 602 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 ERICH1Q86X53 443 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 DCP2Q8IU60 420 aaKnown RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 ZNF683Q8IZ20 524 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 DCAF4L2Q8NA75 395 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 PIP4K2CQ8TBX8 421 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 IFT43Q96FT9 208 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 SERAC1Q96JX3 654 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 SLC6A18Q96N87 628 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 NAA15Q9BXJ9 866 aaKnown RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 TKTL2Q9H0I9 626 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 PDCL3Q9H2J4 239 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 CLSTN2Q9H4D0 955 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 SCUBE2Q9NQ36 999 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 PLCB1Q9NQ66 1216 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 AASDHPPTQ9NRN7 309 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 PPARGC1AQ9UBK2 798 aaKnown RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 FTSJ1Q9UET6 329 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 VPS28Q9UK41 221 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 VANGL2Q9ULK5 521 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 BTBD3Q9Y2F9 522 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 HS3ST3A1Q9Y663 406 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 MUC22E2RYF6 1773 aaPredicted RBP7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 DMXL2Q8TDJ6 3036 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 LAMA5O15230 3695 aa7.99□□□□□ -1.13
PTCSC3-201ENST00000556013 IGF2RP11717 2491 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 WDFY3Q8IZQ1 3526 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 SPEGQ15772 3267 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 TRABD2BA6NFA1 517 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 KCNK3O14649 394 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 ENC1O14682 589 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 GRAP2O75791 330 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 ADCY5O95622 1261 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 PRNPP04156 253 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 ATXN8OSP0DMR3 200 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 SRCP12931 536 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 UCHL3P15374 230 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 ZNF18P17022 549 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 EPHA8P29322 1005 aaPredicted RBP7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 CHRNA3P32297 505 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 ETFBP38117 255 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 PSMD8P48556 350 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 STK19P49842 368 aaPredicted RBP7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 E2F1Q01094 437 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 DEUP1Q05D60 604 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 SHBQ15464 509 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 MIIPQ5JXC2 388 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 AGBL4Q5VU57 503 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 SFMBT2Q5VUG0 894 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 C14orf80Q86SX3 495 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 XYLT1Q86Y38 959 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 PASD1Q8IV76 773 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 ENOX1Q8TC92 643 aaKnown RBP7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 TSC1Q92574 1164 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 ISG20Q96AZ6 181 aaKnown RBP7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 LRIG1Q96JA1 1093 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 HDAC8Q9BY41 377 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 CEP44Q9C0F1 390 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 SIK2Q9H0K1 926 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 MUC3BQ9H195 1237 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 OSBPL2Q9H1P3 480 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 PIGVQ9NUD9 493 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 KLHL11Q9NVR0 708 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 TMEM59LQ9UK28 342 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 SARDHQ9UL12 918 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 GPSM3Q9Y4H4 160 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 CACNA1GO43497 2377 aa7.98□□□□□ -1.13
PTCSC3-201ENST00000556013 PLXNB3Q9ULL4 1909 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 ARID1BQ8NFD5 2236 aaPredicted RBP7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 SYNJ2BP-COX16A0A087WUM0 186 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 CNTN5O94779 1100 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 RHOCP08134 193 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 JUPP14923 745 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 VAV1P15498 845 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 CKMT2P17540 419 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 OR1E1P30953 314 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 HNF1BP35680 557 aa7.97□□□□□ -1.13
PTCSC3-201ENST00000556013 RECQLP46063 649 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms