RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SLC12A1Q13621 1099 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 KLHL17Q6TDP4 642 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 RBMXL3Q8N7X1 1067 aaKnown RBP5.76□□□□□ -1.49
VRK1-203ENST00000555067 ST8SIA4Q92187 359 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 AKAP1Q92667 903 aaKnown RBP eCLIP5.76□□□□□ -1.49
VRK1-203ENST00000555067 SLC25A28Q96A46 364 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 PRPF18Q99633 342 aaKnown RBP5.76□□□□□ -1.49
VRK1-203ENST00000555067 ELAC1Q9H777 363 aaKnown RBP5.76□□□□□ -1.49
VRK1-203ENST00000555067 PLSCR4Q9NRQ2 329 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 ZNF112Q9UJU3 913 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 A0A087WZ62 844 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 PI4KAP2A4QPH2 592 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 B4DLN1 442 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 ZNF814B7Z6K7 855 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 CCNT2O60583 730 aaKnown RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 CBFA2T3O75081 653 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 ITGA2BP08514 1039 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 TBXAS1P24557 533 aaPredicted RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 ATICP31939 592 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 IDUAP35475 653 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 UBA7P41226 1012 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 CDKN2AP42771 156 aaKnown RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 POLD2P49005 469 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 CHRNDQ07001 517 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 TSTQ16762 297 aaKnown RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 PRTGQ2VWP7 1150 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 ABLIM2Q6H8Q1 611 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 ACAD10Q6JQN1 1059 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 SNX32Q86XE0 403 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 CCDC117Q8IWD4 279 aaPredicted RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 DDX23Q9BUQ8 820 aaKnown RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 GATA5Q9BWX5 397 aaPredicted RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 MAGEB5Q9BZ81 275 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 VPS33BQ9H267 617 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 PABPC3Q9H361 631 aaKnown RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 MOV10Q9HCE1 1003 aaKnown RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 ASNSD1Q9NWL6 643 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 TMOD4Q9NZQ9 345 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 TBC1D29Q9UFV1 150 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 AGO2Q9UKV8 859 aaKnown RBP5.75□□□□□ -1.49
VRK1-203ENST00000555067 VPS4AQ9UN37 437 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 PCDHA12Q9UN75 941 aa5.75□□□□□ -1.49
VRK1-203ENST00000555067 TRBV5-3A0A0A0MS03 114 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 PRYO14603 147 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 EPN2O95208 641 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 ARP10275 920 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 RXRAP19793 462 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 DRD1P21728 446 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 MMP8P22894 467 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 NDUFS1P28331 727 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 SLC5A2P31639 672 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 ACTN2P35609 894 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 IGHMBP2P38935 993 aaKnown RBP5.74□□□□□ -1.49
VRK1-203ENST00000555067 PLCB4Q15147 1175 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 SMAD1Q15797 465 aaKnown RBP5.74□□□□□ -1.49
VRK1-203ENST00000555067 GLE1Q53GS7 698 aaKnown RBP5.74□□□□□ -1.49
VRK1-203ENST00000555067 USP17L6PQ6QN14 398 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 ADGRF4Q8IZF3 695 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 CHCHD4Q8N4Q1 142 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 CCDC150Q8NCX0 1101 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 SCAMP5Q8TAC9 235 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 CSGALNACT1Q8TDX6 532 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 THAP4Q8WY91 577 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 KAT2BQ92831 832 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 CELF1Q92879 486 aaKnown RBP5.74□□□□□ -1.49
VRK1-203ENST00000555067 SNX27Q96L92 541 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 TIGD1Q96MW7 591 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 CAMK1GQ96NX5 476 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 GPR63Q9BZJ6 419 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 TAF1DQ9H5J8 278 aaPredicted RBP5.74□□□□□ -1.49
VRK1-203ENST00000555067 MRPL44Q9H9J2 332 aaKnown RBP5.74□□□□□ -1.49
VRK1-203ENST00000555067 SEPSECSQ9HD40 501 aaKnown RBP5.74□□□□□ -1.49
VRK1-203ENST00000555067 HAUS2Q9NVX0 235 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 MSRB1Q9NZV6 116 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 COG5Q9UP83 839 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 PCDHB2Q9Y5E7 798 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 SPATA31A5Q5VU36 1347 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 SPATA31A7Q8IWB4 1347 aa5.74□□□□□ -1.49
VRK1-203ENST00000555067 CCDC196A0A1B0GTZ2 297 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 PABPN1LA6NDY0 278 aaKnown RBP5.73□□□□□ -1.49
VRK1-203ENST00000555067 PRPF4O43172 522 aaKnown RBP eCLIP5.73□□□□□ -1.49
VRK1-203ENST00000555067 ZC3H11AO75152 810 aaKnown RBP eCLIP5.73□□□□□ -1.49
VRK1-203ENST00000555067 COQ9O75208 318 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 ACTL6BO94805 426 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 NDUFB8O95169 186 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 HNRNPA1P09651 372 aaKnown RBP eCLIP5.73□□□□□ -1.49
VRK1-203ENST00000555067 ALOX12P18054 663 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 CDC25AP30304 524 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 HOXD13P35453 343 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 POLE2P56282 527 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 INPP5JQ15735 1006 aaPredicted RBP5.73□□□□□ -1.49
VRK1-203ENST00000555067 CCDC92Q53HC0 331 aaPredicted RBP5.73□□□□□ -1.49
VRK1-203ENST00000555067 UBAP2Q5T6F2 1119 aaKnown RBP5.73□□□□□ -1.49
VRK1-203ENST00000555067 FAXCQ5TGI0 409 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 FAM90A2PQ658T7 463 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 MRNIPQ6NTE8 343 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 B4GALNT4Q76KP1 1039 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 TRAPPC11Q7Z392 1133 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 CHD1LQ86WJ1 897 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 GATAD2AQ86YP4 633 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms