RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 LDLRP01130 860 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CYP4B1P13584 511 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SLC1A6P48664 564 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 ACSM2AQ08AH3 577 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC153Q494R4 210 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PAGE2BQ5JRK9 111 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 ACSM2BQ68CK6 577 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 TCEAL6Q6IPX3 200 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 USP45Q70EL2 814 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 UBE2R2Q712K3 238 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PAFAH2Q99487 392 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CORO1BQ9BR76 489 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PHTF1Q9UMS5 762 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PSMD13Q9UNM6 376 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 GIT1Q9Y2X7 761 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SLC28A2O43868 658 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CLPTM1O96005 669 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 GFOD2Q3B7J2 385 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PITRM1Q5JRX3 1037 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CHRDL2Q6WN34 429 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SP8Q8IXZ3 490 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CHP1Q99653 195 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 BDH2Q9BUT1 245 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SHROOM2Q13796 1616 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 MAGEA13PA6NCF6 341 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SERPINF2P08697 491 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NR2F1P10589 423 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CD151P48509 253 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PPP2R2BQ00005 443 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF155Q12901 538 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PTGISQ16647 500 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 SETD9Q8NE22 299 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 OR4A15Q8NGL6 344 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NSMCE2Q96MF7 247 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 VPS35Q96QK1 796 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CD248Q9HCU0 757 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 EFCAB6Q5THR3 1501 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 LRATO95237 230 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CPA3P15088 417 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NFIAQ12857 509 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 STK4Q13043 487 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 RASA2Q15283 850 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 DGUOKQ16854 277 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF484Q5JVG2 852 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 ARMC12Q5T9G4 340 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 TMEM237Q96Q45 408 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NCAM2O15394 837 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 S100A6P06703 90 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 DPEP1P16444 411 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PSEN2P49810 448 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NEK3P51956 506 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 CHN2P52757 468 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 NAA30Q147X3 362 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 KPNB1Q14974 876 aaKnown RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 PDK2Q15119 407 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 OAFQ86UD1 273 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 FAIM2Q9BWQ8 316 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 EPB41L1Q9H4G0 881 aa6.98□□□□□ -1.29
SYNE2-216ENST00000555002 GPC6Q9Y625 555 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-216ENST00000555002 KIAA0556O60303 1618 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 O00370 1275 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CCNB2O95067 398 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 IL1BP01584 269 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CYP2C8P10632 490 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SPIBQ01892 262 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 NAB2Q15742 525 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SLC18A3Q16572 532 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PFKFB4Q16877 469 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RFX4Q33E94 735 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 NEK5Q6P3R8 708 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SERPINA13PQ6UXR4 307 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 LRRC34Q8IZ02 419 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FBXO30Q8TB52 745 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FNDC11Q9BVV2 318 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 AGPAT5Q9NUQ2 364 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MTMR4Q9NYA4 1195 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RSL1D1O76021 490 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 IFNA6P05013 189 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MAD2L1Q13257 205 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PYHIN1Q6K0P9 492 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SNX20Q7Z614 316 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 KBTBD2Q8IY47 623 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF615Q8N8J6 731 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 NELL1Q92832 810 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RNF31Q96EP0 1072 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MAGEB18Q96M61 343 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FERD3LQ96RJ6 166 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 KCNH7Q9NS40 1196 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ACOT9Q9Y305 439 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 GHRP10912 638 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ITPKBP27987 946 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PIK3CGP48736 1102 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PTPN5P54829 565 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ACAD10Q6JQN1 1059 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CNSTQ6PJW8 725 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 IZUMO2Q6UXV1 221 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CXXC5Q7LFL8 322 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 KCNMB4Q86W47 210 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 LNX2Q8N448 690 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 COLGALT1Q8NBJ5 622 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms