RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PNMA2Q9UL42 364 aa5.52□□□□□ -1.53
SCFD1-211ENST00000554437 ZC3H11AO75152 810 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 WDHD1O75717 1129 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 METTL18O95568 372 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 CNPP09543 421 aaKnown RBP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 CHRNB1P11230 501 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 FCGR2AP12318 317 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 MVDP53602 400 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 ARHGAP8P85298 464 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 SETQ01105 290 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 SRSF1Q07955 248 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 INPP5JQ15735 1006 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 PLK5Q496M5 336 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 C5orf22Q49AR2 442 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 MANEAQ5SRI9 462 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 VWA5B1Q5TIE3 1220 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 SMAP1Q8IYB5 467 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 MASTLQ96GX5 879 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 CTDSP1Q9GZU7 261 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 SPAG4Q9NPE6 437 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 DECR2Q9NUI1 292 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 ANAPC4Q9UJX5 808 aa5.51□□□□□ -1.53
SCFD1-211ENST00000554437 LAS1LQ9Y4W2 734 aaKnown RBP5.51□□□□□ -1.53
SCFD1-211ENST00000554437 A0A0G2JK05 382 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 LY6G6EA0A0G2JKS1 128 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 CCDC189A1A4V9 331 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 TMEM247A6NEH6 219 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 A6NNC1 897 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 ANP32CO43423 234 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 NDUFB8O95169 186 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 NR4A2P43354 598 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 ALDH7A1P49419 539 aaKnown RBP5.5□□□□□ -1.53
SCFD1-211ENST00000554437 BYSLQ13895 437 aaKnown RBP5.5□□□□□ -1.53
SCFD1-211ENST00000554437 RAPGEF1Q13905 1077 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 AP5B1Q2VPB7 878 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 ENTPD8Q5MY95 495 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 DENND1BQ6P3S1 775 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 AAGABQ6PD74 315 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 MMP21Q8N119 569 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 NME8Q8N427 588 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 USP38Q8NB14 1042 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 STAMQ92783 540 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 MSI2Q96DH6 328 aaKnown RBP5.5□□□□□ -1.53
SCFD1-211ENST00000554437 HMCESQ96FZ2 354 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 UBXN10Q96LJ8 280 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 TWNKQ96RR1 684 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 IFT27Q9BW83 186 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-211ENST00000554437 HIPK3Q9H422 1215 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 ACTR5Q9H9F9 607 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-211ENST00000554437 SEMA4BQ9NPR2 832 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-211ENST00000554437 POT1Q9NUX5 634 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 UPB1Q9UBR1 384 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 SUFUQ9UMX1 484 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 PCDHA12Q9UN75 941 aa5.5□□□□□ -1.53
SCFD1-211ENST00000554437 TMEM272A0A1B0GTI8 110 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 VWA3AA6NCI4 1184 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 INO80B-WBP1J3KQ70 363 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 KLK10O43240 276 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 STRNO43815 780 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 TULP3O75386 442 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 CKMT1AP12532 417 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 SLC16A2P36021 539 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 MAPK9P45984 424 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 TMEM95Q3KNT9 176 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 TTLL5Q6EMB2 1281 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 AADACL2Q6P093 401 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 CYP26C1Q6V0L0 522 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 KDELC2Q7Z4H8 507 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 SCAIQ8N9R8 606 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 TMEM174Q8WUU8 243 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 NCSTNQ92542 709 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 FCRL4Q96PJ5 515 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 RRN3Q9NYV6 651 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 DHDHQ9UQ10 334 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 GDAQ9Y2T3 454 aa5.49□□□□□ -1.53
SCFD1-211ENST00000554437 PEX12O00623 359 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 DHX16O60231 1041 aaKnown RBP5.48□□□□□ -1.53
SCFD1-211ENST00000554437 TSPAN3O60637 253 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 ATG13O75143 517 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 WEE2P0C1S8 567 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 SKIV2L2P42285 1042 aaKnown RBP5.48□□□□□ -1.53
SCFD1-211ENST00000554437 UBE3AQ05086 875 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 HNRNPA0Q13151 305 aaKnown RBP5.48□□□□□ -1.53
SCFD1-211ENST00000554437 IL13RA2Q14627 380 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 SH2D4BQ5SQS7 431 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 TMEM268Q5VZI3 342 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 COLCA1Q6ZS62 124 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 PIM3Q86V86 326 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 FAM185AQ8N0U4 392 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 SLC25A41Q8N5S1 370 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 DPP10Q8N608 796 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 CMASQ8NFW8 434 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-211ENST00000554437 SLC25A28Q96A46 364 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 RNFT2Q96EX2 444 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 NLRP4Q96MN2 994 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 ZNF48Q96MX3 618 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-211ENST00000554437 REEP2Q9BRK0 252 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 PNRC2Q9NPJ4 139 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms