RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 TBC1D3FA6NER0 549 aaPredicted RBP22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TBC1D3LB9A6J9 549 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TBC1D3HP0C7X1 549 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 CYP11B1P15538 503 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TFE3P19532 575 aaPredicted RBP22.45■■□□□ 1.18
RCCD1-202ENST00000554302 NXPH1P58417 271 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 SMAD1Q15797 465 aaKnown RBP22.45■■□□□ 1.18
RCCD1-202ENST00000554302 DPCR1Q3MIW9 517 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 AGBL4Q5VU57 503 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 FAM46CQ5VWP2 391 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TBC1D3GQ6DHY5 549 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TBC1D3CQ6IPX1 549 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TBC1D3Q8IZP1 549 aaPredicted RBP22.45■■□□□ 1.18
RCCD1-202ENST00000554302 GALNT15Q8N3T1 639 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TMEM35BQ8NCS4 154 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 SERAC1Q96JX3 654 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 NAA15Q9BXJ9 866 aaKnown RBP22.45■■□□□ 1.18
RCCD1-202ENST00000554302 TKTL2Q9H0I9 626 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 SIK2Q9H0K1 926 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 CCDC86Q9H6F5 360 aaKnown RBP22.45■■□□□ 1.18
RCCD1-202ENST00000554302 WDCPQ9H6R7 721 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 SYNCQ9H7C4 482 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 ERVMER34-1Q9H9K5 563 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.45■■□□□ 1.18
RCCD1-202ENST00000554302 DKK4Q9UBT3 224 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 VPS28Q9UK41 221 aa22.45■■□□□ 1.18
RCCD1-202ENST00000554302 DRGXA6NNA5 263 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 TLR4O00206 839 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 PLK4O00444 970 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 RTN2O75298 545 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 CNTN5O94779 1100 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 PRKCSHP14314 528 aaPredicted RBP22.44■■□□□ 1.18
RCCD1-202ENST00000554302 NUDT1P36639 197 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 CAMK2BQ13554 666 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 DRAP1Q14919 205 aaPredicted RBP22.44■■□□□ 1.18
RCCD1-202ENST00000554302 ALFQ53S48 1182 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 KLHDC7AQ5VTJ3 777 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 NAPEPLDQ6IQ20 393 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 LRSAM1Q6UWE0 723 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 BNIPLQ7Z465 357 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 GATAD2AQ86YP4 633 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 C1orf74Q96LT6 269 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 PSMB7Q99436 277 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 GDF3Q9NR23 364 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 TMEM51Q9NW97 253 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 STAP1Q9ULZ2 295 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 FHOD1Q9Y613 1164 aa22.44■■□□□ 1.18
RCCD1-202ENST00000554302 GOLGA8CPA6NN73 597 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 YKT6O15498 198 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 F9P00740 461 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 SRCP12931 536 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 RXRGP48443 463 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 SULT1E1P49888 294 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 CNTN1Q12860 1018 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 SLC25A52Q3SY17 297 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 ACCSLQ4AC99 568 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 Q6ZVU0 165 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 PRPF39Q86UA1 669 aaKnown RBP22.43■■□□□ 1.18
RCCD1-202ENST00000554302 TRIM69Q86WT6 500 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 XYLT1Q86Y38 959 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 MFSD2AQ8NA29 543 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 PIP4K2CQ8TBX8 421 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 MDM1Q8TC05 714 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 C18orf8Q96DM3 657 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 CHMP5Q9NZZ3 219 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 FTSJ1Q9UET6 329 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 DMTF1Q9Y222 760 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 GPSM3Q9Y4H4 160 aa22.43■■□□□ 1.18
RCCD1-202ENST00000554302 IGLV3-10A0A075B6K4 115 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 C1QTNF3-AMACRE9PGA6 284 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 MT-CO1P00395 513 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 EPHA8P29322 1005 aaPredicted RBP22.42■■□□□ 1.18
RCCD1-202ENST00000554302 TAS2R38P59533 333 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 RNASE9P60153 205 aaKnown RBP22.42■■□□□ 1.18
RCCD1-202ENST00000554302 SLC45A4Q5BKX6 768 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 ACBD5Q5T8D3 534 aaPredicted RBP22.42■■□□□ 1.18
RCCD1-202ENST00000554302 SETD3Q86TU7 594 aaPredicted RBP22.42■■□□□ 1.18
RCCD1-202ENST00000554302 IQCHQ86VS3 1027 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 TBCBQ99426 244 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 PCDHGA1Q9Y5H4 931 aa22.42■■□□□ 1.18
RCCD1-202ENST00000554302 CTSLP07711 333 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 KRT83P78385 493 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 DEUP1Q05D60 604 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 RAPGEF1Q13905 1077 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 TRNP1Q6NT89 227 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 KANSL1Q7Z3B3 1105 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 SPATS2Q86XZ4 545 aaKnown RBP22.41■■□□□ 1.18
RCCD1-202ENST00000554302 MARCH9Q86YJ5 346 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 OXR1Q8N573 874 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 OR2A12Q8NGT7 310 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 C2orf49Q9BVC5 232 aaPredicted RBP22.41■■□□□ 1.18
RCCD1-202ENST00000554302 MUC3BQ9H195 1237 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 ZNF212Q9UDV6 495 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 VPS51Q9UID3 782 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 TMEM59LQ9UK28 342 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 LHX6Q9UPM6 363 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 PAXBP1Q9Y5B6 917 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 SNX10Q9Y5X0 201 aa22.41■■□□□ 1.18
RCCD1-202ENST00000554302 SNAP91O60641 907 aa22.4■■□□□ 1.18
RCCD1-202ENST00000554302 LSM8O95777 96 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms