RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 FGF10O15520 208 aaPredicted RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 RAMP2O60895 175 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 RNASEH1O60930 286 aaKnown RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 MT-CO1P00395 513 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 SRCP12931 536 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 IL1R2P27930 398 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 HTR7P34969 479 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 ETFBP38117 255 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 SSR1P43307 286 aaKnown RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 TPMTP51580 245 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 SMTNL2Q2TAL5 461 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 KCNT1Q5JUK3 1230 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 ZNF776Q68DI1 518 aaPredicted RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 STK40Q8N2I9 435 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 FRS2Q8WU20 508 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 PTPRN2Q92932 1015 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 ARHGEF2Q92974 986 aaKnown RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 PANX2Q96RD6 677 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 EIF3CQ99613 913 aaKnown RBP23.81■■□□□ 1.4
NEK9-203ENST00000553945 MAGEH1Q9H213 219 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 HS3ST2Q9Y278 367 aa23.81■■□□□ 1.4
NEK9-203ENST00000553945 DAPK3O43293 454 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 NDUFS2O75306 463 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 EPN2O95208 641 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 DNTTP04053 509 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 DHPSP49366 369 aaPredicted RBP23.8■■□□□ 1.4
NEK9-203ENST00000553945 RPL6Q02878 288 aaKnown RBP23.8■■□□□ 1.4
NEK9-203ENST00000553945 POLD3Q15054 466 aaPredicted RBP23.8■■□□□ 1.4
NEK9-203ENST00000553945 BOLA3Q53S33 107 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 RETSATQ6NUM9 610 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 DEFB119Q8N690 84 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 HSPH1Q92598 858 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 ACE2Q9BYF1 805 aaPredicted RBP23.8■■□□□ 1.4
NEK9-203ENST00000553945 ARRDC1-AS1Q9H2J1 176 aa23.8■■□□□ 1.4
NEK9-203ENST00000553945 ZNF292O60281 2723 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 WASH4PA8MWX3 477 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 K7ERQ8 282 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 BNIP3LO60238 219 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 ZMPSTE24O75844 475 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 GOT1P17174 413 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 SPEM2Q0P670 501 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 Q6ZVU0 165 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 ARMCX6Q7L4S7 300 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 FAM124AQ86V42 546 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 ZNF354CQ86Y25 554 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 MMAAQ8IVH4 418 aaKnown RBP23.79■■□□□ 1.4
NEK9-203ENST00000553945 TOE1Q96GM8 510 aaKnown RBP23.79■■□□□ 1.4
NEK9-203ENST00000553945 FAM129BQ96TA1 746 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 OSGEPQ9NPF4 335 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 HPCAL4Q9UM19 191 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 PIEZO1Q92508 2521 aa23.79■■□□□ 1.4
NEK9-203ENST00000553945 ABCA7Q8IZY2 2146 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 TMEM110-MUSTN1A8MSY1 372 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 SMAD6O43541 496 aaKnown RBP23.78■■□□□ 1.4
NEK9-203ENST00000553945 PROSCO94903 275 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 RARAP10276 462 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 CD6P30203 668 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 OXTRP30559 389 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 ARF5P84085 180 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 CREB5Q02930 508 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 ZBTB16Q05516 673 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 TXNRD3NBQ6F5E7 133 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 SLC35G2Q8TBE7 412 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 GANCQ8TET4 914 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 NOL6Q9H6R4 1146 aaKnown RBP23.78■■□□□ 1.4
NEK9-203ENST00000553945 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.78■■□□□ 1.4
NEK9-203ENST00000553945 DONSONQ9NYP3 566 aa23.78■■□□□ 1.4
NEK9-203ENST00000553945 CEP192Q8TEP8 1941 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 IGLV3-19P01714 112 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 C7P10643 843 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 CDC25BP30305 580 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 MAGEA1P43355 309 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 PSMD8P48556 350 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 ZNF135P52742 658 aaPredicted RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 SLC25A11Q02978 314 aaKnown RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 SLC20A2Q08357 652 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 ELAVL3Q14576 367 aaKnown RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 CST6Q15828 149 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 CCDC6Q16204 474 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 HADHQ16836 314 aaKnown RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 TTC31Q49AM3 519 aaPredicted RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 RFX8Q6ZV50 586 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 CPNE8Q86YQ8 564 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 CCDC170Q8IYT3 715 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 SPC24Q8NBT2 197 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 TEKT4Q8WW24 435 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 OR8D1Q8WZ84 308 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 PABPC3Q9H361 631 aaKnown RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 PARD6AQ9NPB6 346 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 WSB2Q9NYS7 404 aaPredicted RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 CWC15Q9P013 229 aaKnown RBP23.77■■□□□ 1.4
NEK9-203ENST00000553945 LCMT1Q9UIC8 334 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 INTUQ9ULD6 942 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 PCDHGA5Q9Y5G8 931 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 CHD5Q8TDI0 1954 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 CFAP54Q96N23 3096 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 GPR179Q6PRD1 2367 aa23.77■■□□□ 1.4
NEK9-203ENST00000553945 OTOGLQ3ZCN5 2332 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 H3BRJ5 948 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 MID1O15344 667 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms