RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 EVA1BQ9NVM1 165 aa11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
SUPT16H-202ENST00000552829 A0A1B0GVL5 298 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 NEMP2A6NFY4 417 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 PPP6R2O75170 966 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 GJB6O95452 261 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 PIK3CAP42336 1068 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC11A2P49281 568 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 STK19P49842 368 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 PDX1P52945 283 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 RAD23BP54727 409 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 AMPD3Q01432 767 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 SRSF6Q13247 344 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 NUGGCQ68CJ6 796 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 ZCCHC8Q6NZY4 707 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 GUSBP11Q6P575 273 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 RBM44Q6ZP01 1051 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 ABI3BPQ7Z7G0 1075 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 APCDD1Q8J025 514 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC22A18ASQ8N1D0 253 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 TAS1R2Q8TE23 839 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 ARRDC3Q96B67 414 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 RPL10LQ96L21 214 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 NOX5Q96PH1 765 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 SPAG5Q96R06 1193 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 PREBQ9HCU5 417 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC39A2Q9NP94 309 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 ABCC13Q9NSE7 274 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 PPM1HQ9ULR3 514 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 PCDHGA7Q9Y5G6 932 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 CSNK1G3Q9Y6M4 447 aa11.72□□□□□ -0.53
SUPT16H-202ENST00000552829 CCDC187A0A096LP49 1063 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 SYCE3A1L190 88 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 XPO1O14980 1071 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 CASC3O15234 703 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC31A1O15431 190 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 CUTAO60888 179 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 NEBLO76041 1014 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC5A2P31639 672 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 MCCD1P59942 119 aaPredicted RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 ZNF177Q13360 481 aaPredicted RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 TBR1Q16650 682 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 CDKN3Q16667 212 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 ZNF284Q2VY69 593 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 MS4A13Q5J8X5 152 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 EFL1Q7Z2Z2 1120 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 CARNMT1Q8N4J0 409 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 FAXDC2Q96IV6 333 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 ARHGAP9Q9BRR9 750 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 KCTD10Q9H3F6 313 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 GEMIN8Q9NWZ8 242 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 NCKIPSDQ9NZQ3 722 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 SALL4Q9UJQ4 1053 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 MAN2B2Q9Y2E5 1009 aa11.71□□□□□ -0.53
SUPT16H-202ENST00000552829 CENPEQ02224 2701 aa11.71□□□□□ -0.54
SUPT16H-202ENST00000552829 ZFC3H1O60293 1989 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PVALEFA0A1B0GWK0 134 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 A0A1W2PQ27 194 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 A0A1W2PQ64 194 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 CPED1A4D0V7 1026 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PPFIA2O75334 1257 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 LUC7L3O95232 432 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 MOCS3O95396 460 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PFKFB1P16118 471 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PRLRP16471 622 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 CASP1P29466 404 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 CLCN6P51797 869 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PLK1P53350 603 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 DAOAP59103 153 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PPP3CAQ08209 521 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 ADIGQ0VDE8 80 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 CDH18Q13634 790 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 TGIF1Q15583 401 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 C4orf17Q53FE4 359 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 DCAF6Q58WW2 860 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PERM1Q5SV97 790 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PIP5KL1Q5T9C9 394 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 FAM46CQ5VWP2 391 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 NEK5Q6P3R8 708 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 GCNT7Q6ZNI0 430 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 DCP2Q8IU60 420 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 CFAP52Q8N1V2 620 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 ZNF548Q8NEK5 533 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 KCTD13Q8WZ19 329 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 OR8D1Q8WZ84 308 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 KLK6Q92876 244 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 TATDN2Q93075 761 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 LIN37Q96GY3 246 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 FCRL2Q96LA5 508 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 PCMTD1Q96MG8 357 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms