RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 ZNF670Q9BS34 389 aa13.44□□□□□ -0.26
CDK4-212ENST00000552388 C2orf49Q9BVC5 232 aaPredicted RBP13.44□□□□□ -0.26
CDK4-212ENST00000552388 ACE2Q9BYF1 805 aaPredicted RBP13.44□□□□□ -0.26
CDK4-212ENST00000552388 KLC2Q9H0B6 622 aa13.44□□□□□ -0.26
CDK4-212ENST00000552388 TMEM245Q9H330 911 aa13.44□□□□□ -0.26
CDK4-212ENST00000552388 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
CDK4-212ENST00000552388 NOL6Q9H6R4 1146 aaKnown RBP13.44□□□□□ -0.26
CDK4-212ENST00000552388 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
CDK4-212ENST00000552388 CXorf51AA0A1B0GTR3 108 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 A0A1W2PQF6 199 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 GRID2IPA4D2P6 1211 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 ZNF487B1APH4 448 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 K7ESF4 209 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 DCLK1O15075 740 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 TDGF1P13385 188 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 HOXB2P14652 356 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 AMPD1P23109 780 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 KDELR1P24390 212 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 HOXA6P31267 233 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 ACVRL1P37023 503 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 WASP42768 502 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 CTSOP43234 321 aaPredicted RBP13.43□□□□□ -0.26
CDK4-212ENST00000552388 DGKEP52429 567 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 NDST2P52849 883 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 CCDC173Q0VFZ6 552 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
CDK4-212ENST00000552388 PARP15Q460N3 678 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 SERPINA13PQ6UXR4 307 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 LZTR1Q8N653 840 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 KCTD6Q8NC69 237 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 KIAA1524Q8TCG1 905 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 RAPGEF5Q92565 580 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 FAF2Q96CS3 445 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 RMDN1Q96DB5 314 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 LRRC19Q9H756 370 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 CD248Q9HCU0 757 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 ATP13A1Q9HD20 1204 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 KLHL11Q9NVR0 708 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
CDK4-212ENST00000552388 DDX56Q9NY93 547 aaKnown RBP13.43□□□□□ -0.26
CDK4-212ENST00000552388 VPS51Q9UID3 782 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 SLC8A2Q9UPR5 921 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 HS3ST2Q9Y278 367 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 CEP250Q9BV73 2442 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 CEP192Q8TEP8 1941 aa13.43□□□□□ -0.26
CDK4-212ENST00000552388 SNAP91O60641 907 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 PRKCHP24723 683 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 NNMTP40261 264 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 NUMBP49757 651 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 STK19P49842 368 aaPredicted RBP13.42□□□□□ -0.26
CDK4-212ENST00000552388 ST8SIA6P61647 398 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 ARF5P84085 180 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 ZNF528Q3MIS6 628 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 FNDC3BQ53EP0 1204 aaKnown RBP13.42□□□□□ -0.26
CDK4-212ENST00000552388 ANKRD20A8PQ5CZ79 823 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 ZFYVE27Q5T4F4 411 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 AFMIDQ63HM1 303 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 IL31Q6EBC2 164 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 NELL1Q92832 810 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 RPL10LQ96L21 214 aaKnown RBP13.42□□□□□ -0.26
CDK4-212ENST00000552388 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 CALN1Q9BXU9 219 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 POLMQ9NP87 494 aaPredicted RBP13.42□□□□□ -0.26
CDK4-212ENST00000552388 DLL3Q9NYJ7 618 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 SLCO3A1Q9UIG8 710 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 SLC25A13Q9UJS0 675 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDK4-212ENST00000552388 RAD54BQ9Y620 910 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 CAPN6Q9Y6Q1 641 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 GPR179Q6PRD1 2367 aa13.42□□□□□ -0.26
CDK4-212ENST00000552388 ANKRD36A6QL64 1941 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 CCDC163A0A0D9SF12 145 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 LRRD1A4D1F6 860 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 C3orf70A6NLC5 250 aaPredicted RBP13.41□□□□□ -0.26
CDK4-212ENST00000552388 RASA4BC9J798 803 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 CBX4O00257 560 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 RASA4O43374 803 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 KDELR3O43731 214 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 ATP9BO43861 1147 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 PALMO75781 387 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 KRT1P04264 644 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 EPHX1P07099 455 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 HLA-EP13747 358 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 TNNT1P13805 278 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 GLDCP23378 1020 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 CTNNA1P35221 906 aaKnown RBP13.41□□□□□ -0.26
CDK4-212ENST00000552388 SERPINB6P35237 376 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
CDK4-212ENST00000552388 SLC20A2Q08357 652 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 CAMK2GQ13555 558 aaPredicted RBP13.41□□□□□ -0.26
CDK4-212ENST00000552388 STARD3Q14849 445 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 HNRNPA1L2Q32P51 320 aaKnown RBP13.41□□□□□ -0.26
CDK4-212ENST00000552388 RETSATQ6NUM9 610 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 KIAA1211LQ6NV74 962 aa13.41□□□□□ -0.26
CDK4-212ENST00000552388 TSSK4Q6SA08 328 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms