RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 MGARPQ8TDB4 240 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 STAMBPL1Q96FJ0 436 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 PRICKLE1Q96MT3 831 aaPredicted RBP20.1■□□□□ 0.81
SSH1-209ENST00000551165 RAD9AQ99638 391 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 TCF25Q9BQ70 676 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 KLF16Q9BXK1 252 aaPredicted RBP20.1■□□□□ 0.81
SSH1-209ENST00000551165 KCNK9Q9NPC2 374 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 TMEM51Q9NW97 253 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 IL1RAPL1Q9NZN1 696 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 SLC4A7Q9Y6M7 1214 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 TTC24A2A3L6 582 aaPredicted RBP20.1■□□□□ 0.81
SSH1-209ENST00000551165 SDR42E2A6NKP2 422 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 SUN1O94901 812 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 TPH1P17752 444 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 KRT15P19012 456 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 OR1E1P30953 314 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 HARS2P49590 506 aaKnown RBP20.1■□□□□ 0.81
SSH1-209ENST00000551165 NDST2P52849 883 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 ITPRIPL1Q6GPH6 555 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 LILRA6Q6PI73 481 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 TAOK1Q7L7X3 1001 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 C4orf33Q8N1A6 199 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 PKNOX2Q96KN3 472 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 ZFRQ96KR1 1074 aaKnown RBP20.1■□□□□ 0.81
SSH1-209ENST00000551165 SLC17A6Q9P2U8 582 aa20.1■□□□□ 0.81
SSH1-209ENST00000551165 ZFP37Q9Y6Q3 630 aaPredicted RBP20.1■□□□□ 0.81
SSH1-209ENST00000551165 F5H5T6 163 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 CACNG3O60359 315 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 SPAG7O75391 227 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 MSH2P43246 934 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 SLC10A7Q0GE19 358 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 CERCAMQ5T4B2 595 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 ZNF354CQ86Y25 554 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 ARL14EPQ8N8R7 260 aaPredicted RBP20.09■□□□□ 0.81
SSH1-209ENST00000551165 TTC16Q8NEE8 873 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 SP7Q8TDD2 431 aaPredicted RBP20.09■□□□□ 0.81
SSH1-209ENST00000551165 MZB1Q8WU39 189 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 ATXN2LQ8WWM7 1075 aaKnown RBP20.09■□□□□ 0.81
SSH1-209ENST00000551165 C17orf80Q9BSJ5 609 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 CNOT10Q9H9A5 744 aaKnown RBP20.09■□□□□ 0.81
SSH1-209ENST00000551165 GLOD4Q9HC38 313 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 AGO1Q9UL18 857 aaKnown RBP20.09■□□□□ 0.81
SSH1-209ENST00000551165 PCDHA11Q9Y5I1 949 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 DOCK6Q96HP0 2047 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 A0A0D9SEW6 157 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 TSPAN3O60637 253 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 GJA1P17302 382 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 ATP5DP30049 168 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 CTNNB1P35222 781 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 MAXP61244 160 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 CYP4F8P98187 520 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 PLPP4Q5VZY2 271 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 FOXR1Q6PIV2 292 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 GAREM2Q75VX8 874 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 CTAGE3PQ8IX95 158 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 PPM1NQ8N819 430 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 ANKRD42Q8N9B4 389 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 ACTL7AQ9Y615 435 aa20.09■□□□□ 0.81
SSH1-209ENST00000551165 PRKCHP24723 683 aa20.08■□□□□ 0.81
SSH1-209ENST00000551165 IHHQ14623 411 aa20.08■□□□□ 0.81
SSH1-209ENST00000551165 PSRC1Q6PGN9 363 aaPredicted RBP20.08■□□□□ 0.81
SSH1-209ENST00000551165 SLC22A17Q8WUG5 538 aa20.08■□□□□ 0.81
SSH1-209ENST00000551165 SLC44A1Q8WWI5 657 aa20.08■□□□□ 0.81
SSH1-209ENST00000551165 HERVK_113Q902F9 699 aa20.08■□□□□ 0.81
SSH1-209ENST00000551165 PABPC5Q96DU9 382 aaKnown RBP20.08■□□□□ 0.81
SSH1-209ENST00000551165 KLF6Q99612 283 aaPredicted RBP20.08■□□□□ 0.81
SSH1-209ENST00000551165 CASS4Q9NQ75 786 aa20.08■□□□□ 0.81
SSH1-209ENST00000551165 FETUBQ9UGM5 382 aa20.08■□□□□ 0.81
SSH1-209ENST00000551165 H3BNC9 293 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 RAMP2O60895 175 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 SPAG6O75602 509 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 MBL2P11226 248 aaPredicted RBP20.08■□□□□ 0.8
SSH1-209ENST00000551165 BMPR1AP36894 532 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 SLC11A2P49281 568 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 POLD3Q15054 466 aaPredicted RBP20.08■□□□□ 0.8
SSH1-209ENST00000551165 KDELC2Q7Z4H8 507 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 DNAAF3Q8N9W5 541 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 GSDMBQ8TAX9 411 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 ADAMTS19Q8TE59 1207 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 FCRL3Q96P31 734 aaPredicted RBP20.08■□□□□ 0.8
SSH1-209ENST00000551165 TRABDQ9H4I3 376 aa20.08■□□□□ 0.8
SSH1-209ENST00000551165 BPTFQ12830 3046 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 OBSL1O75147 1896 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 GRXCR1A8MXD5 290 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 GJB3O75712 270 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 C8AP07357 584 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 GABRR2P28476 465 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 STX2P32856 288 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 IFNAR2P48551 515 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 DMTNQ08495 405 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 STXBP5Q5T5C0 1151 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 TIGD7Q6NT04 549 aaPredicted RBP20.07■□□□□ 0.8
SSH1-209ENST00000551165 PLD4Q96BZ4 506 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 FCRL5Q96RD9 977 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 LRRC3Q9BY71 257 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 ENTPD7Q9NQZ7 604 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.07■□□□□ 0.8
SSH1-209ENST00000551165 CARNS1A5YM72 827 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 GOLGA8RI6L899 631 aa20.07■□□□□ 0.8
SSH1-209ENST00000551165 ZNF189O75820 626 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms