RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 MAT2AP31153 395 aaKnown RBP22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 CNTN1Q12860 1018 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 NME3Q13232 169 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 EXOC3L4Q17RC7 722 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 OR6B2Q6IFH4 312 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 SLC26A9Q7LBE3 791 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 C14orf80Q86SX3 495 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 SH2D3CQ8N5H7 860 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 PIP4K2CQ8TBX8 421 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 NOX5Q96PH1 765 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 VPS28Q9UK41 221 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 NYNRINQ9P2P1 1898 aaKnown RBP22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 C1QTNF3-AMACRE9PGA6 284 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 MAGEC1O60732 1142 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 PAGE1O75459 146 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 DAB1O75553 588 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 ERBB2P04626 1255 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 PON1P27169 355 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 NOS2P35228 1153 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 HNF1BP35680 557 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 GGCXP38435 758 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 CLDN6P56747 220 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 SLC6A3Q01959 620 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 PTK2Q05397 1052 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 Q6ZVU0 165 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 IRF2BP1Q8IU81 584 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 C1orf131Q8NDD1 294 aaKnown RBP22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 ZNF397Q8NF99 534 aaPredicted RBP22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 LRIG1Q96JA1 1093 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 HS3ST2Q9Y278 367 aa22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 TP53BP1Q12888 1972 aaPredicted RBP22.28■■□□□ 1.16
SMARCC2-210ENST00000550519 M0QYT0 321 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 CDH4P55283 916 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 TAS2R38P59533 333 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 STAT4Q14765 748 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 POM121L1PQ3SYA9 428 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 PTPN20Q4JDL3 420 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 OTUD1Q5VV17 481 aaPredicted RBP22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 CREBRFQ8IUR6 639 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 PREBQ9HCU5 417 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 SIX2Q9NPC8 291 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 KIAA1468Q9P260 1216 aa22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 AJAP1Q9UKB5 411 aaPredicted RBP22.27■■□□□ 1.16
SMARCC2-210ENST00000550519 ASXL3Q9C0F0 2248 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 PRAMEF26H0Y7S4 382 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 SRCP12931 536 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 ZNF18P17022 549 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 CLCN1P35523 988 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 SNX16P57768 344 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 ILKQ13418 452 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 SETMARQ53H47 684 aaPredicted RBP22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 C6orf118Q5T5N4 469 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 FBXL19Q6PCT2 694 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 NXPE2Q96DL1 559 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 PSMB7Q99436 277 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 NPY6RQ99463 290 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 SIK2Q9H0K1 926 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 PIGVQ9NUD9 493 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 ARHGEF38Q9NXL2 777 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 RRN3Q9NYV6 651 aa22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 ARID1BQ8NFD5 2236 aaPredicted RBP22.26■■□□□ 1.15
SMARCC2-210ENST00000550519 I6L893 689 aaPredicted RBP22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 CNTN5O94779 1100 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 ADCY5O95622 1261 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 MT-CO1P00395 513 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 CTSLP07711 333 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 CKMT2P17540 419 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 KRT9P35527 623 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 CXCR3P49682 368 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 TARDBPQ13148 414 aaKnown RBP eCLIP22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 PIP5KL1Q5T9C9 394 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 HES3Q5TGS1 186 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 SLC47A2Q86VL8 602 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 ZNF683Q8IZ20 524 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 TMEM145Q8NBT3 493 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 NT5C3BQ969T7 300 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 BBC3Q96PG8 261 aaPredicted RBP22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 MUC3BQ9H195 1237 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 ANLNQ9NQW6 1124 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 DNAJC12Q9UKB3 198 aa22.25■■□□□ 1.15
SMARCC2-210ENST00000550519 FOXN3O00409 490 aaPredicted RBP22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 BNIP3LO60238 219 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 RNGTTO60942 597 aaKnown RBP22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 KRT83P78385 493 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 ALFQ53S48 1182 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 BRMS1LQ5PSV4 323 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 NEK5Q6P3R8 708 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 ZDHHC17Q8IUH5 632 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 OR2A12Q8NGT7 310 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 PGAP3Q96FM1 320 aaPredicted RBP22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 TKTL2Q9H0I9 626 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 WDCPQ9H6R7 721 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 SYNCQ9H7C4 482 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 CA5BQ9Y2D0 317 aa22.24■■□□□ 1.15
SMARCC2-210ENST00000550519 DRGXA6NNA5 263 aa22.23■■□□□ 1.15
SMARCC2-210ENST00000550519 SNAP91O60641 907 aa22.23■■□□□ 1.15
SMARCC2-210ENST00000550519 PNMA6AP0CW24 399 aaPredicted RBP22.23■■□□□ 1.15
SMARCC2-210ENST00000550519 TFE3P19532 575 aaPredicted RBP22.23■■□□□ 1.15
SMARCC2-210ENST00000550519 CHRNA3P32297 505 aa22.23■■□□□ 1.15
SMARCC2-210ENST00000550519 RTP5Q14D33 572 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms