RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ATP9BO43861 1147 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 ENDOD1O94919 500 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
COX6A1-203ENST00000550009 SRCP12931 536 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 ATP1A3P13637 1013 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 MAT2AP31153 395 aaKnown RBP16.34■□□□□ 0.21
COX6A1-203ENST00000550009 SOX5P35711 763 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 AFF3P51826 1226 aaKnown RBP16.34■□□□□ 0.21
COX6A1-203ENST00000550009 CDH4P55283 916 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 FAM72AQ5TYM5 149 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 FAM72DQ6L9T8 149 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 FAM72BQ86X60 149 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 ZNF557Q8N988 423 aaPredicted RBP16.34■□□□□ 0.21
COX6A1-203ENST00000550009 PGAP3Q96FM1 320 aaPredicted RBP16.34■□□□□ 0.21
COX6A1-203ENST00000550009 MUC3BQ9H195 1237 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 PCED1AQ9H1Q7 454 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 TNKS2Q9H2K2 1166 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 TOR4AQ9NXH8 423 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 TMEM63CQ9P1W3 806 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 ADAMTS1Q9UHI8 967 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 VPS51Q9UID3 782 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 NCKAP1Q9Y2A7 1128 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 LOC400499M0QZD8 3231 aa16.34■□□□□ 0.21
COX6A1-203ENST00000550009 A0A1W2PPC4 97 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 DRGXA6NNA5 263 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 RNASEH1O60930 286 aaKnown RBP16.33■□□□□ 0.2
COX6A1-203ENST00000550009 RHOCP08134 193 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 ATXN1LP0C7T5 689 aaKnown RBP16.33■□□□□ 0.2
COX6A1-203ENST00000550009 FTH1P19P0C7X4 201 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 GOT1P17174 413 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 CTSKP43235 329 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 TAS2R38P59533 333 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 CDR2Q01850 454 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 CNTN1Q12860 1018 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 SLC12A1Q13621 1099 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 SHBQ15464 509 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 CCDC14Q49A88 953 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 BRMS1LQ5PSV4 323 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 TTC39BQ5VTQ0 682 aaPredicted RBP16.33■□□□□ 0.2
COX6A1-203ENST00000550009 GATAD2AQ86YP4 633 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 ZDHHC17Q8IUH5 632 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 NETO2Q8NC67 525 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 BAHD1Q8TBE0 780 aaPredicted RBP16.33■□□□□ 0.2
COX6A1-203ENST00000550009 RXFP2Q8WXD0 754 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 KLK6Q92876 244 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 ARRDC3Q96B67 414 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 ZDHHC5Q9C0B5 715 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 LIMA1Q9UHB6 759 aaKnown RBP16.33■□□□□ 0.2
COX6A1-203ENST00000550009 SLC25A13Q9UJS0 675 aa16.33■□□□□ 0.2
COX6A1-203ENST00000550009 IGLV3-10A0A075B6K4 115 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 A0A1W2PR77 199 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 TEX33O43247 280 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 CLDN11O75508 207 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 ZNF821O75541 412 aaPredicted RBP16.32■□□□□ 0.2
COX6A1-203ENST00000550009 LSM8O95777 96 aaKnown RBP16.32■□□□□ 0.2
COX6A1-203ENST00000550009 CER1O95813 267 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 PROS1P07225 676 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 UNGP13051 313 aaPredicted RBP16.32■□□□□ 0.2
COX6A1-203ENST00000550009 C5AR1P21730 350 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 MMP8P22894 467 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 GRIA4P48058 902 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 CLDN6P56747 220 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 SLC14A1Q13336 389 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 ELAVL3Q14576 367 aaKnown RBP16.32■□□□□ 0.2
COX6A1-203ENST00000550009 AGBL4Q5VU57 503 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 DBX2Q6ZNG2 339 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 RAB44Q7Z6P3 723 aaPredicted RBP16.32■□□□□ 0.2
COX6A1-203ENST00000550009 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 CCDC185Q8N715 623 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 OR2T34Q8NGX1 318 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 PIP4K2CQ8TBX8 421 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 ARHGAP20Q9P2F6 1191 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 ZMIZ1Q9ULJ6 1067 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 PPM1HQ9ULR3 514 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 STAP1Q9ULZ2 295 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 SCML1Q9UN30 329 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 NEU3Q9UQ49 428 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 CHD6Q8TD26 2715 aa16.32■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3DA0A087WVF3 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3IA0A087WXS9 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3EA0A087X179 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3KA0A087X1G2 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3FA6NER0 549 aaPredicted RBP16.31■□□□□ 0.2
COX6A1-203ENST00000550009 LGALS16A8MUM7 142 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3LB9A6J9 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 CD160O95971 181 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 ADH1BP00325 375 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3HP0C7X1 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 ACVRL1P37023 503 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 SCNN1AP37088 669 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 SULT2A1Q06520 285 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 CT47A1Q5JQC4 288 aaPredicted RBP16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3GQ6DHY5 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3CQ6IPX1 549 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 SND1Q7KZF4 910 aaKnown RBP eCLIP16.31■□□□□ 0.2
COX6A1-203ENST00000550009 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
COX6A1-203ENST00000550009 DRC7Q8IY82 874 aa16.31■□□□□ 0.2
COX6A1-203ENST00000550009 TBC1D3Q8IZP1 549 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms