RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 ACE2Q9BYF1 805 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 DDX47Q9H0S4 455 aaKnown RBP7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 EBF3Q9H4W6 596 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 KCNK12Q9HB15 430 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 PCDH9Q9HC56 1237 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 SLC2A4RGQ9NR83 387 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 RBM12Q9NTZ6 932 aaKnown RBP7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 PAK5Q9P286 719 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 ZNF212Q9UDV6 495 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 IPO11Q9UI26 975 aaKnown RBP7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 SLC25A13Q9UJS0 675 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 GGA2Q9UJY4 613 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 DNPEPQ9ULA0 475 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 SNX10Q9Y5X0 201 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 MUC3AQ02505 3323 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 KIAA1549LQ6ZVL6 1849 aa7.31□□□□□ -1.24
CALCOCO1-211ENST00000548431 NUP205Q92621 2012 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 TCRBV7S2A1N4TA0A589 114 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 TARSL2A2RTX5 802 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 C5orf60A6NFR6 353 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ERI2A8K979 691 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 AP3B1O00203 1094 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CBX4O00257 560 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PDE2AO00408 941 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 TRDMT1O14717 391 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 MATN3O15232 486 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 KCNN4O15554 427 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 MAFKO60675 156 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PRAMEF11O60813 436 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 GCATO75600 419 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 APODP05090 189 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 SRFP11831 508 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CCNB1P14635 433 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 POLR2EP19388 210 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CA4P22748 312 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 VASPP50552 380 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PAPOLAP51003 745 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ST8SIA6P61647 398 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CAV1Q03135 178 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 TNK2Q07912 1038 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ADCY2Q08462 1091 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 C2orf54Q08AI8 447 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CALCOCO2Q13137 446 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 TDGQ13569 410 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 SNX1Q13596 522 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PTK6Q13882 451 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 GRM2Q14416 872 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PRPSAP1Q14558 356 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ZNF235Q14590 738 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 GRM3Q14832 879 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 LLGL1Q15334 1064 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PLEKHG6Q3KR16 790 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 MARC1Q5VT66 337 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ARHGEF18Q6ZSZ5 1173 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ARHGAP12Q8IWW6 846 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 KLHL7Q8IXQ5 586 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ETFBKMTQ8IXQ9 262 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 EIF1ADQ8N9N8 165 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 KCNV2Q8TDN2 545 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 C1orf54Q8WWF1 131 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ATG4AQ8WYN0 398 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 WBP2Q969T9 261 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 P2RY11Q96G91 374 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CELF6Q96J87 481 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 PNKPQ96T60 521 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 SPON2Q9BUD6 331 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CINPQ9BW66 212 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 FRMD8Q9BZ67 464 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 MAGEB5Q9BZ81 275 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 SLC39A8Q9C0K1 460 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 KLC2Q9H0B6 622 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 TSPYL1Q9H0U9 437 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 LINC00597Q9H2U6 94 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ABCB8Q9NUT2 735 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 ETNK2Q9NVF9 386 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 DNAJC17Q9NVM6 304 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 UBA2Q9UBT2 640 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 LIMD1Q9UGP4 676 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 SEPT3Q9UH03 358 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 CDH22Q9UJ99 828 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 FBXO10Q9UK96 956 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 R3HDM2Q9Y2K5 976 aaKnown RBP7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 COL4A2P08572 1712 aa7.3□□□□□ -1.24
CALCOCO1-211ENST00000548431 SHROOM3Q8TF72 1996 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 TCF20Q9UGU0 1960 aaKnown RBP7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 TICRRQ7Z2Z1 1910 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 A0A0A0MRY4 1105 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 RNF103O00237 685 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 ARNTLO00327 626 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 MAN2B1O00754 1011 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 SCAMP3O14828 347 aaKnown RBP7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 PSMD3O43242 534 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 TULP3O75386 442 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 ANXA9O76027 345 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 IFNB1P01574 187 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 SRPRAP08240 638 aaKnown RBP7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 ITIH2P19823 946 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 NFKBIAP25963 317 aa7.29□□□□□ -1.24
CALCOCO1-211ENST00000548431 HLA-FP30511 346 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms