RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 GATA5Q9BWX5 397 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 FTHL17Q9BXU8 183 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 DSEQ9UL01 958 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ARHGEF37A1IGU5 675 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 C2P06681 752 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 IL4RP24394 825 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 CSHL1Q14406 222 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 PPP1R3AQ16821 1122 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 PRAMEF19Q5SWL8 479 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 LRRC38Q5VT99 294 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 CLEC6AQ6EIG7 209 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 FSTL4Q6MZW2 842 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 LPCAT2Q7L5N7 544 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 NT5DC4Q86YG4 428 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 SLC2A14Q8TDB8 520 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 SENP6Q9GZR1 1112 aaPredicted RBP14.94□□□□□ -0.02
HOXC11-202ENST00000546378 DNAAF2Q9NVR5 837 aaKnown RBP14.94□□□□□ -0.02
HOXC11-202ENST00000546378 DTLQ9NZJ0 730 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 SIRPGQ9P1W8 387 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 SBF1O95248 1867 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 STBD1O95210 358 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 VAPBO95292 243 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 LYPLA2O95372 231 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 LSM8O95777 96 aaKnown RBP14.94□□□□□ -0.02
HOXC11-202ENST00000546378 RAP1GDS1P52306 607 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 TTC30AQ86WT1 665 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 KYQ8NBH2 561 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 CMASQ8NFW8 434 aaPredicted RBP14.94□□□□□ -0.02
HOXC11-202ENST00000546378 LENG1Q96BZ8 264 aaPredicted RBP14.94□□□□□ -0.02
HOXC11-202ENST00000546378 FCRL3Q96P31 734 aaPredicted RBP14.94□□□□□ -0.02
HOXC11-202ENST00000546378 DPP3Q9NY33 737 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 PTGDR2Q9Y5Y4 395 aa14.94□□□□□ -0.02
HOXC11-202ENST00000546378 MKI67P46013 3256 aaKnown RBP14.94□□□□□ -0.02
HOXC11-202ENST00000546378 C9IYK1 514 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CHADO15335 359 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 GLRA3O75311 464 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 GJA9P57773 515 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 MPP1Q00013 466 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 ADIGQ0VDE8 80 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 PLA2G4EQ3MJ16 856 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 OTUD3Q5T2D3 398 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CST9Q5W186 159 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 MPZL3Q6UWV2 235 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 DEFB106AQ8N104 65 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 KCTD15Q96SI1 283 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 HBEGFQ99075 208 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 PCYT2Q99447 389 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 PTPN18Q99952 460 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 SIKE1Q9BRV8 207 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 MRPL46Q9H2W6 279 aaKnown RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 DHX33Q9H6R0 707 aaKnown RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 FBRSL1Q9HCM7 1045 aaKnown RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 TUBGCP4Q9UGJ1 667 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 ATAD5Q96QE3 1844 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 C2CD4BA6NLJ0 364 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 GIPC1O14908 333 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CRABP2P29373 138 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 SLC12A2P55011 1212 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CAPRIN1Q14444 709 aaKnown RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 OTOP3Q7RTS5 596 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 SAPCD2Q86UD0 394 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 HASPINQ8TF76 798 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CERS2Q96G23 380 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 NR1H4Q96RI1 486 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 KCNK16Q96T55 309 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 PAIP1Q9H074 479 aaKnown RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 ZDHHC2Q9UIJ5 367 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 TRIP11Q15643 1979 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 DOCK5Q9H7D0 1870 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 NCF1BA6NI72 391 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 NCF1CA8MVU1 366 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 MT-CYBP00156 380 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 POLBP06746 335 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 NCF1P14598 390 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 IGFBP6P24592 240 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CRHR1P34998 444 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 TAP1Q03518 808 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 TAF1CQ15572 869 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 ANKDD1AQ495B1 522 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 FSCBQ5H9T9 825 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 FAM47CQ5HY64 1035 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 SEL1L3Q68CR1 1132 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 DRICH1Q6PGQ1 229 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 XKR5Q6UX68 686 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CDKL3Q8IVW4 592 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 FAM47BQ8NA70 645 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 SEPT1Q8WYJ6 367 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 CSPG4P5Q96PW8 444 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 SEPHS2Q99611 448 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 COQ10BQ9H8M1 238 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 NMRAL1Q9HBL8 299 aa14.93□□□□□ -0.02
HOXC11-202ENST00000546378 MTF2Q9Y483 593 aaPredicted RBP14.93□□□□□ -0.02
HOXC11-202ENST00000546378 USP34Q70CQ2 3546 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 J3QRK9 145 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 TGDSO95455 350 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 CEACAM7Q14002 265 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 FAM160B1Q5W0V3 765 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 SPRYD7Q5W111 196 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 ARMCX2Q7L311 632 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 LILRA2Q8N149 483 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms