RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 THADAQ6YHU6 1953 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 DOCK4Q8N1I0 1966 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 SSU72P8A0A1W2PR75 194 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 ALOX15BO15296 676 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 SNAP91O60641 907 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 NDUFS2O75306 463 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 ZMPSTE24O75844 475 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 SDHBP21912 280 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 GNA12Q03113 381 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 SFSWAPQ12872 951 aaKnown RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 ACAP1Q15027 740 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 SF3A2Q15428 464 aaKnown RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 DLG2Q15700 870 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 CST6Q15828 149 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 ASTE1Q2TB18 679 aaPredicted RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 RWDD4Q6NW29 188 aaKnown RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 CACUL1Q86Y37 369 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 PSTKQ8IV42 348 aaKnown RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 RTL3Q8N8U3 475 aaKnown RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 OR7D4Q8NG98 312 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 DNASE2BQ8WZ79 361 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 FAM129BQ96TA1 746 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 EPAS1Q99814 870 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 ACE2Q9BYF1 805 aaPredicted RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 MAGEB5Q9BZ81 275 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 TRIM7Q9C029 511 aa12.16□□□□□ -0.46
YBX3-217ENST00000546164 PABPC3Q9H361 631 aaKnown RBP12.16□□□□□ -0.46
YBX3-217ENST00000546164 WASH4PA8MWX3 477 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 MFAP3LO75121 409 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 LRCH4O75427 683 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 RNF8O76064 485 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 ADH1BP00325 375 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 MT-CO1P00395 513 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 CYP1A2P05177 515 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 TPM1P09493 284 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 SRCP12931 536 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 ITPKAP23677 461 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 EPHB2P29323 1055 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 PCK1P35558 622 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 EIF4A3P38919 411 aaKnown RBP12.15□□□□□ -0.46
YBX3-217ENST00000546164 NUMBP49757 651 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 LIMK1P53667 647 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 TBX2Q13207 712 aaPredicted RBP12.15□□□□□ -0.46
YBX3-217ENST00000546164 CCDC6Q16204 474 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 SLC18A3Q16572 532 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 CCDC122Q5T0U0 273 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 RETSATQ6NUM9 610 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 CYP4V2Q6ZWL3 525 aaPredicted RBP12.15□□□□□ -0.46
YBX3-217ENST00000546164 ARMCX6Q7L4S7 300 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 RABEPKQ7Z6M1 372 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 DSG4Q86SJ6 1040 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 PYROXD2Q8N2H3 581 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 STK40Q8N2I9 435 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 NIPA2Q8N8Q9 360 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
YBX3-217ENST00000546164 PIGKQ92643 395 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 FAM131CQ96AQ9 280 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 RMDN1Q96DB5 314 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 HSPA12BQ96MM6 686 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 GPR174Q9BXC1 333 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 THAP2Q9H0W7 228 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 MAGEH1Q9H213 219 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 SGK2Q9HBY8 427 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 ABHD10Q9NUJ1 306 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 TMEM74BQ9NUR3 256 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 NDFIP2Q9NV92 336 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 MYO1AQ9UBC5 1043 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 FZD4Q9ULV1 537 aa12.15□□□□□ -0.46
YBX3-217ENST00000546164 NUP205Q92621 2012 aa12.15□□□□□ -0.47
YBX3-217ENST00000546164 CACNA1EQ15878 2313 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 METTL12A8MUP2 240 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 C10orf142B7Z368 130 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 KHNYNO15037 678 aaKnown RBP12.14□□□□□ -0.47
YBX3-217ENST00000546164 MCF2LO15068 1137 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 FGF10O15520 208 aaPredicted RBP12.14□□□□□ -0.47
YBX3-217ENST00000546164 RAMP2O60895 175 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 VAV1P15498 845 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 C5AR1P21730 350 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 MIPP30301 263 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 SLC8A1P32418 973 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 ACSL1P33121 698 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 ID4P47928 161 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
YBX3-217ENST00000546164 ZNF135P52742 658 aaPredicted RBP12.14□□□□□ -0.47
YBX3-217ENST00000546164 ARF5P84085 180 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 PIGHQ14442 188 aaPredicted RBP12.14□□□□□ -0.47
YBX3-217ENST00000546164 PUM1Q14671 1186 aaKnown RBP eCLIP12.14□□□□□ -0.47
YBX3-217ENST00000546164 RSPO4Q2I0M5 234 aaPredicted RBP12.14□□□□□ -0.47
YBX3-217ENST00000546164 TSR1Q2NL82 804 aaKnown RBP12.14□□□□□ -0.47
YBX3-217ENST00000546164 WDR45BQ5MNZ6 344 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 SYCP2LQ5T4T6 812 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 ERMARDQ5T6L9 678 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 TCEAL6Q6IPX3 200 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 SLC23A3Q6PIS1 610 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 Q6ZVU0 165 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 CNGA4Q8IV77 575 aa12.14□□□□□ -0.47
YBX3-217ENST00000546164 MMAAQ8IVH4 418 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms