RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 DGKEP52429 567 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 NDST2P52849 883 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 ST8SIA6P61647 398 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 PARP15Q460N3 678 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 AFMIDQ63HM1 303 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 TSSK4Q6SA08 328 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 NPWQ8N729 165 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 PRRX2Q99811 253 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 SLCO3A1Q9UIG8 710 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 MFHAS1Q9Y4C4 1052 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 CAPN6Q9Y6Q1 641 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 NYNRINQ9P2P1 1898 aaKnown RBP20.96■□□□□ 0.95
HMGA2-211ENST00000545998 LRRD1A4D1F6 860 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 RASA4BC9J798 803 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 CBX4O00257 560 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 RASA4O43374 803 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 HLA-EP13747 358 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 CSTF1Q05048 431 aaKnown RBP20.95■□□□□ 0.94
HMGA2-211ENST00000545998 ANKRD20A8PQ5CZ79 823 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 IL31Q6EBC2 164 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 KIAA1211LQ6NV74 962 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 VSIG1Q86XK7 387 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 ARHGAP12Q8IWW6 846 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 PCDH19Q8TAB3 1148 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 HMCESQ96FZ2 354 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 CELF6Q96J87 481 aaKnown RBP20.95■□□□□ 0.94
HMGA2-211ENST00000545998 HHIPQ96QV1 700 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 SLC25A13Q9UJS0 675 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 HS3ST2Q9Y278 367 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 RAD54BQ9Y620 910 aa20.95■□□□□ 0.94
HMGA2-211ENST00000545998 ZNF487B1APH4 448 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 KRT1P04264 644 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 EPHX1P07099 455 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 HOXA6P31267 233 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 CTNNA1P35221 906 aaKnown RBP20.94■□□□□ 0.94
HMGA2-211ENST00000545998 MARCKSL1P49006 195 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 TMCO3Q6UWJ1 677 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 NT5DC3Q86UY8 548 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 KATNAL2Q8IYT4 538 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 SYCE1Q8N0S2 351 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 CAMKK1Q8N5S9 505 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 LZTR1Q8N653 840 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 ZNF366Q8N895 744 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 PRSS33Q8NF86 280 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 KRT35Q92764 455 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 SLC39A8Q9C0K1 460 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 LZTFL1Q9NQ48 299 aa20.94■□□□□ 0.94
HMGA2-211ENST00000545998 CXorf51AA0A1B0GTR3 108 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 TTC34A8MYJ7 566 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 KDELR3O43731 214 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 ATP9BO43861 1147 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 MT-CO1P00395 513 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 ARF5P84085 180 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 SERINC3Q13530 473 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 ZNF528Q3MIS6 628 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 LINGO4Q6UY18 593 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 SH2D3CQ8N5H7 860 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 TSTD1Q8NFU3 115 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 POLMQ9NP87 494 aaPredicted RBP20.93■□□□□ 0.94
HMGA2-211ENST00000545998 HPCAL4Q9UM19 191 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.93■□□□□ 0.94
HMGA2-211ENST00000545998 PCDHA3Q9Y5H8 950 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 APBB3O95704 486 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 SRCP12931 536 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 NNMTP40261 264 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 TCF15Q12870 199 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 STARD3Q14849 445 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 HNRNPA1L2Q32P51 320 aaKnown RBP20.93■□□□□ 0.94
HMGA2-211ENST00000545998 RETSATQ6NUM9 610 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 PQLC3Q8N755 202 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 NETO2Q8NC67 525 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 FRS2Q8WU20 508 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 RNF25Q96BH1 459 aaPredicted RBP20.93■□□□□ 0.94
HMGA2-211ENST00000545998 ERLEC1Q96DZ1 483 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 RNF157Q96PX1 679 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 KCNH6Q9H252 994 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 SUN2Q9UH99 717 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 EML5Q05BV3 1969 aa20.93■□□□□ 0.94
HMGA2-211ENST00000545998 WDR87Q6ZQQ6 2873 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 TCRBV21S2A2A0A5A6 115 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 SYNCRIPO60506 623 aaKnown RBP20.92■□□□□ 0.94
HMGA2-211ENST00000545998 CD160O95971 181 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 SP9P0CG40 484 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 CTNNA2P26232 953 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 PAPOLAP51003 745 aaKnown RBP20.92■□□□□ 0.94
HMGA2-211ENST00000545998 SLC20A2Q08357 652 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 DMWDQ09019 674 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 CAMK2GQ13555 558 aaPredicted RBP20.92■□□□□ 0.94
HMGA2-211ENST00000545998 TAZQ16635 292 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 ODF2Q5BJF6 829 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 NCBP2-AS2Q69YL0 99 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 PEX26Q7Z412 305 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 TP53INP2Q8IXH6 220 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 FANCMQ8IYD8 2048 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 ATP11CQ8NB49 1132 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 NELL1Q92832 810 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 MTG2Q9H4K7 406 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 EBF1Q9UH73 591 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 AMFRQ9UKV5 643 aa20.92■□□□□ 0.94
HMGA2-211ENST00000545998 CCDC66A2RUB6 948 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 714.2 ms