RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 AMIGO3Q86WK7 504 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 PQLC3Q8N755 202 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 BPIFB6Q8NFQ5 453 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 FBXL20Q96IG2 436 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 CPXM1Q96SM3 734 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 SH3GL1Q99961 368 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 EFHD1Q9BUP0 239 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 EHD1Q9H4M9 534 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 ZFYVE28Q9HCC9 887 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 AGO4Q9HCK5 861 aaKnown RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 COL20A1Q9P218 1284 aa12.9□□□□□ -0.34
SMG8-202ENST00000543872 TRPC5Q9UL62 973 aaPredicted RBP12.9□□□□□ -0.34
SMG8-202ENST00000543872 HDAC3O15379 428 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 TRIM13O60858 407 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 GMNNO75496 209 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 MGAT1P26572 445 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 BFSP2Q13515 415 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 FAM102AQ5T9C2 384 aaPredicted RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 HMBOX1Q6NT76 420 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 RSBN1LQ6PCB5 846 aaPredicted RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 BTLAQ7Z6A9 289 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 GMCL1P1Q8NEA9 526 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 ACMSDQ8TDX5 336 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 HGH1Q9BTY7 390 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 CEP41Q9BYV8 373 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 ANKRD60Q9BZ19 345 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 NGRNQ9NPE2 291 aaKnown RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 SNX15Q9NRS6 342 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMG8-202ENST00000543872 FBXO9Q9UK97 447 aaPredicted RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 CNOT6Q9ULM6 557 aaKnown RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 DGKBQ9Y6T7 804 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 FAM47E-STBD1D6RA91 191 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 PRPSAP2O60256 369 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 CCNA2P20248 432 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 CNTFP26441 200 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 EEF1DP29692 281 aaKnown RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 GLRBP48167 497 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 SF3B4Q15427 424 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMG8-202ENST00000543872 NHSL2Q5HYW2 709 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 ZNF534Q76KX8 674 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 ACDQ96AP0 544 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 RNF157Q96PX1 679 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 UNKQ9C0B0 810 aaKnown RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 MOCS1Q9NZB8 636 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 A6NL46 340 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 C9IYK1 514 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 KPNA4O00629 521 aaPredicted RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 CLOCKO15516 846 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 INHBBP09529 407 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 TFEBP19484 476 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 NAGLUP54802 743 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 RHDQ02161 417 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 NFATC3Q12968 1075 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 TAZQ16635 292 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 TMEM132AQ24JP5 1023 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 C15orf52Q6ZUT6 534 aaKnown RBP12.89□□□□□ -0.35
SMG8-202ENST00000543872 ZBTB33Q86T24 672 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 C4orf19Q8IY42 314 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 DCLK2Q8N568 766 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 CCNYL1Q8N7R7 359 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 CANT1Q8WVQ1 401 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 TFAP2CQ92754 450 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 SLCO4A1Q96BD0 722 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 NACC2Q96BF6 587 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 LRRC39Q96DD0 335 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 ADPGKQ9BRR6 497 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 CDYLQ9Y232 598 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 SLC27A5Q9Y2P5 690 aa12.89□□□□□ -0.35
SMG8-202ENST00000543872 APOL1O14791 398 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 ARSAP15289 507 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 GRIA3P42263 894 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 ARL13AQ5H913 290 aaPredicted RBP12.88□□□□□ -0.35
SMG8-202ENST00000543872 CADM3Q8N126 398 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 TMEM143Q96AN5 459 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 SCYL1Q96KG9 808 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 ZC3H12CQ9C0D7 883 aaKnown RBP12.88□□□□□ -0.35
SMG8-202ENST00000543872 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
SMG8-202ENST00000543872 PCDH12Q9NPG4 1184 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 AP4E1Q9UPM8 1137 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 IQCA1LA6NCM1 817 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 TCAF2A6NFQ2 919 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 CCNE2O96020 404 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 S100BP04271 92 aaPredicted RBP12.88□□□□□ -0.35
SMG8-202ENST00000543872 CRKP46108 304 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 GSSP48637 474 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 RPL14P50914 215 aaKnown RBP12.88□□□□□ -0.35
SMG8-202ENST00000543872 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
SMG8-202ENST00000543872 STXBP5Q5T5C0 1151 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms