RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SOX11P35716 441 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 NIPAL4Q0D2K0 466 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 SEMA5AQ13591 1074 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 PNPLA1Q8N8W4 532 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 FAM81AQ8TBF8 368 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 JADE3Q92613 823 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 CDY2AQ9Y6F7 541 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 CDY1Q9Y6F8 540 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 SPTLC1O15269 473 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 PABPC4LP0CB38 370 aaKnown RBP15.62■□□□□ 0.09
CNOT9-208ENST00000542068 PPIL2Q13356 520 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 HNRNPDQ14103 355 aaKnown RBP15.62■□□□□ 0.09
CNOT9-208ENST00000542068 LSM12Q3MHD2 195 aaKnown RBP15.62■□□□□ 0.09
CNOT9-208ENST00000542068 NOTUMQ6P988 496 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 SLC27A1Q6PCB7 646 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 ZNF567Q8N184 647 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 RAB3IL1Q8TBN0 382 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 MRPL1Q9BYD6 325 aaKnown RBP15.62■□□□□ 0.09
CNOT9-208ENST00000542068 DNAJC28Q9NX36 388 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 MKS1Q9NXB0 559 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.62■□□□□ 0.09
CNOT9-208ENST00000542068 SORCS3Q9UPU3 1222 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 GNEQ9Y223 722 aaKnown RBP15.62■□□□□ 0.09
CNOT9-208ENST00000542068 NME7Q9Y5B8 376 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 SNX10Q9Y5X0 201 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 SCN1AP35498 2009 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 DNAJA2O60884 412 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 C2P06681 752 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 MTTPP55157 894 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 TMED1Q13445 227 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 MAP3K21Q5TCX8 1036 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 KLHDC10Q6PID8 442 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 KBTBD6Q86V97 674 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 RNF135Q8IUD6 432 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 METTL25Q8N6Q8 603 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 KYQ8NBH2 561 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 PKP2Q99959 881 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 ANLNQ9NQW6 1124 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 CHRAC1Q9NRG0 131 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 DNAJC25-GNG10A0A024R161 153 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 BTBD19C9JJ37 291 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 TREHO43280 583 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 CDKL1Q00532 357 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 ITGA7Q13683 1181 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 RARS2Q5T160 578 aaKnown RBP15.61■□□□□ 0.09
CNOT9-208ENST00000542068 RWDD4Q6NW29 188 aaKnown RBP15.61■□□□□ 0.09
CNOT9-208ENST00000542068 CYP2R1Q6VVX0 501 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 BNC2Q6ZN30 1099 aaPredicted RBP15.61■□□□□ 0.09
CNOT9-208ENST00000542068 TIFABQ6ZNK6 161 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 RPS27LQ71UM5 84 aaKnown RBP15.61■□□□□ 0.09
CNOT9-208ENST00000542068 TTC16Q8NEE8 873 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 CELF6Q96J87 481 aaKnown RBP15.61■□□□□ 0.09
CNOT9-208ENST00000542068 SUDS3Q9H7L9 328 aaPredicted RBP15.61■□□□□ 0.09
CNOT9-208ENST00000542068 NMRAL1Q9HBL8 299 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 GALNT8Q9NY28 637 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 NUDT5Q9UKK9 219 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 TFAP2AP05549 437 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 HDCP19113 662 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 ARL13AQ5H913 290 aaPredicted RBP15.61■□□□□ 0.09
CNOT9-208ENST00000542068 WSCD1Q658N2 575 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 PPTC7Q8NI37 304 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 TMEM40Q8WWA1 233 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 PCDHAC1Q9H158 963 aa15.61■□□□□ 0.09
CNOT9-208ENST00000542068 MEIS3P2A8K0S8 358 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 SNAI1O95863 264 aaPredicted RBP15.6■□□□□ 0.09
CNOT9-208ENST00000542068 SMIM18P0DKX4 95 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 RPL10P27635 214 aaKnown RBP15.6■□□□□ 0.09
CNOT9-208ENST00000542068 GRIA4P48058 902 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 SNX16P57768 344 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 CYLC2Q14093 348 aaPredicted RBP15.6■□□□□ 0.09
CNOT9-208ENST00000542068 MYLK3Q32MK0 819 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 C9orf57Q5W0N0 161 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 EPGNQ6UW88 154 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 ZNF354CQ86Y25 554 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 LILRA2Q8N149 483 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 LPPQ93052 612 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 ILKAPQ9H0C8 392 aaPredicted RBP15.6■□□□□ 0.09
CNOT9-208ENST00000542068 PSMD13Q9UNM6 376 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 SMIM28A0A1B0GU29 152 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 H3BSA7 217 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 TRIM13O60858 407 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 BEST1O76090 585 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 NCAM1P13591 858 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 CNTFP26441 200 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 BST2Q10589 180 aaKnown RBP15.6■□□□□ 0.09
CNOT9-208ENST00000542068 CEACAM7Q14002 265 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 SYPL2Q5VXT5 272 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 LRRC8BQ6P9F7 803 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 HFE2Q6ZVN8 426 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 GRIN3AQ8TCU5 1115 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 URGCPQ8TCY9 931 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 KCTD4Q8WVF5 259 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 APBA2Q99767 749 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 FERMT1Q9BQL6 677 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 SLC4A5Q9BY07 1137 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 PCDHB12Q9Y5F1 795 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 MDM4O15151 490 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 MMP3P08254 477 aa15.6■□□□□ 0.09
CNOT9-208ENST00000542068 HOXA11P31270 313 aaPredicted RBP15.6■□□□□ 0.09
CNOT9-208ENST00000542068 SPRP35270 261 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms