RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 TMTC1Q8IUR5 882 aa14.62□□□□□ -0.07
LTBR-209ENST00000541102 CEP76Q8TAP6 659 aa14.62□□□□□ -0.07
LTBR-209ENST00000541102 CENPIQ92674 756 aaPredicted RBP14.62□□□□□ -0.07
LTBR-209ENST00000541102 PGAP3Q96FM1 320 aaPredicted RBP14.62□□□□□ -0.07
LTBR-209ENST00000541102 FEM1AQ9BSK4 669 aa14.62□□□□□ -0.07
LTBR-209ENST00000541102 NUP85Q9BW27 656 aa14.62□□□□□ -0.07
LTBR-209ENST00000541102 GTPBP2Q9BX10 602 aaKnown RBP14.62□□□□□ -0.07
LTBR-209ENST00000541102 MIR1-1HGQ9H1L0 117 aa14.62□□□□□ -0.07
LTBR-209ENST00000541102 FBRSQ9HAH7 460 aa14.62□□□□□ -0.07
LTBR-209ENST00000541102 OSGEPQ9NPF4 335 aa14.62□□□□□ -0.07
LTBR-209ENST00000541102 EDDM13A0A1B0GTR0 161 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 EIF3CLB5ME19 914 aaKnown RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 CDX4O14627 284 aaPredicted RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 TM4SF5O14894 197 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 RNASEH1O60930 286 aaKnown RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 SRGAP2O75044 1071 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 CLDN11O75508 207 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 SERPINF2P08697 491 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 TCF4P15884 667 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 SDC4P31431 198 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 ACSL1P33121 698 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 RDXP35241 583 aaKnown RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 HOXD12P35452 270 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 PLK1P53350 603 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 ATXN3P54252 364 aaPredicted RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 CDH4P55283 916 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 ZBTB16Q05516 673 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 SULT2A1Q06520 285 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 TTC31Q49AM3 519 aaPredicted RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 ALFQ53S48 1182 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 C9orf64Q5T6V5 341 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 DCAF12L1Q5VU92 463 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 CCDC170Q8IYT3 715 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 KDM1BQ8NB78 822 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 OR52K2Q8NGK3 314 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 FAM172AQ8WUF8 416 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 TRIM11Q96F44 468 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 PDLIM2Q96JY6 352 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 PPP1R9BQ96SB3 815 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 EIF3CQ99613 913 aaKnown RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 DESI2Q9BSY9 194 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 RSPH9Q9H1X1 276 aaPredicted RBP14.61□□□□□ -0.07
LTBR-209ENST00000541102 MPP6Q9NZW5 540 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 VPS28Q9UK41 221 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 NCKAP1Q9Y2A7 1128 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 PCDHA13Q9Y5I0 950 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 DCHS1Q96JQ0 3298 aa14.61□□□□□ -0.07
LTBR-209ENST00000541102 NUMA1Q14980 2115 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 TNRC6BQ9UPQ9 1833 aaKnown RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 TARSL2A2RTX5 802 aaKnown RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 METTL12A8MUP2 240 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 IGLV3-19P01714 112 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 RHOCP08134 193 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 TMEM253P0C7T8 217 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 GNSP15586 552 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 GSDMDP57764 484 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 CCZ1BP86790 482 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 CCZ1P86791 482 aaPredicted RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 C5orf22Q49AR2 442 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 ACCSLQ4AC99 568 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 PEAR1Q5VY43 1037 aaPredicted RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 RABEPKQ7Z6M1 372 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 MMAAQ8IVH4 418 aaKnown RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 LRRC8AQ8IWT6 810 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 STK40Q8N2I9 435 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 CCDC185Q8N715 623 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 CADM4Q8NFZ8 388 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 SNX19Q92543 992 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 C1orf74Q96LT6 269 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 CNPY3Q9BT09 278 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 BTBD1Q9H0C5 482 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 MUC3BQ9H195 1237 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 C6orf106Q9H6K1 298 aaPredicted RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 TMEM51Q9NW97 253 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 FBXL12Q9NXK8 326 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 SUSD2Q9UGT4 822 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 EIF2B4Q9UI10 523 aaKnown RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 SALL4Q9UJQ4 1053 aa14.6□□□□□ -0.07
LTBR-209ENST00000541102 MUC22E2RYF6 1773 aaPredicted RBP14.6□□□□□ -0.07
LTBR-209ENST00000541102 DRGXA6NNA5 263 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 E9PAM4 449 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 MID1O15344 667 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 VAV1P15498 845 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 PSMA2P25787 234 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 SLC8A1P32418 973 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 CYLC1P35663 651 aaPredicted RBP14.59□□□□□ -0.07
LTBR-209ENST00000541102 MAGEA1P43355 309 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 PSMD8P48556 350 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 CYP4V2Q6ZWL3 525 aaPredicted RBP14.59□□□□□ -0.07
LTBR-209ENST00000541102 STRADAQ7RTN6 431 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 TFAP2DQ7Z6R9 452 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 ZNF683Q8IZ20 524 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 ZCCHC9Q8N567 271 aaKnown RBP14.59□□□□□ -0.07
LTBR-209ENST00000541102 OR2I1PQ8NGU4 316 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 SLC35G2Q8TBE7 412 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 ZNF564Q8TBZ8 553 aaPredicted RBP14.59□□□□□ -0.07
LTBR-209ENST00000541102 CTNNBL1Q8WYA6 563 aaPredicted RBP14.59□□□□□ -0.07
LTBR-209ENST00000541102 PTPRN2Q92932 1015 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 ALG14Q96F25 216 aa14.59□□□□□ -0.07
LTBR-209ENST00000541102 HAPLN3Q96S86 360 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms