RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ALKAL1Q6UXT8 129 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.4
NPC1-202ENST00000540608 SETD3Q86TU7 594 aaPredicted RBP12.52□□□□□ -0.4
NPC1-202ENST00000540608 PIGZQ86VD9 579 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 PPTC7Q8NI37 304 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 STON2Q8WXE9 905 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 DGCR14Q96DF8 476 aaKnown RBP12.52□□□□□ -0.4
NPC1-202ENST00000540608 MFSD3Q96ES6 412 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 LRGUKQ96M69 825 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 CDRT15Q96T59 188 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 NDNQ99608 321 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 DNAI2Q9GZS0 605 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 SETD4Q9NVD3 440 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 RAB26Q9ULW5 256 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 ANKRD6Q9Y2G4 727 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 RAD54BQ9Y620 910 aa12.52□□□□□ -0.4
NPC1-202ENST00000540608 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.4
NPC1-202ENST00000540608 SYNJ2BP-COX16A0A087WUM0 186 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 ERI2A8K979 691 aaKnown RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 M0QYT0 321 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 PIRO00625 290 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 CHRNGP07510 517 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 F7P08709 466 aaPredicted RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 SMIM18P0DKX4 95 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 ETS2P15036 469 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 MPSTP25325 297 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 NPY2RP49146 381 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 CSRP3P50461 194 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 CLCN2P51788 898 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 GLRA4Q5JXX5 417 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 FBXO47Q5MNV8 452 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 LIPMQ5VYY2 423 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 SLC27A1Q6PCB7 646 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 ZYG11AQ6WRX3 759 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 BNC2Q6ZN30 1099 aaPredicted RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 TMEM151AQ8N4L1 468 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 ACVR1CQ8NER5 493 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 CDCA5Q96FF9 252 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 ACE2Q9BYF1 805 aaPredicted RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 ZCWPW1Q9H0M4 648 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 ZNF385DQ9H6B1 395 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 C20orf96Q9NUD7 363 aaPredicted RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 COX16Q9P0S2 106 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 PACSIN3Q9UKS6 424 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 H3BRB1 525 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 GRID2O43424 1007 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 CABYRO75952 493 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 TFEBP19484 476 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 CYP2B6P20813 491 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 ABCG1P45844 678 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 GRIA4P48058 902 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 PDCD2Q16342 344 aaPredicted RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 CERCAMQ5T4B2 595 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 KCNMB4Q86W47 210 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 SPATA24Q86W54 205 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 CATSPER1Q8NEC5 780 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 VPS39Q96JC1 886 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 EIF2AQ9BY44 585 aaKnown RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 IL22Q9GZX6 179 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
NPC1-202ENST00000540608 GDAP2Q9NXN4 497 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 VTI1BQ9UEU0 232 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 GJD2Q9UKL4 321 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 HES2Q9Y543 173 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 SCN4AP35499 1836 aa12.52□□□□□ -0.41
NPC1-202ENST00000540608 SLCO1B7G3V0H7 640 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 NEMP1O14524 444 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 SPTLC1O15269 473 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 NCAM2O15394 837 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 ATP9BO43861 1147 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 CYP2C9P11712 490 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 EPHA3P29320 983 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 TKTP29401 623 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 PMLP29590 882 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 PPARGP37231 505 aaPredicted RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 RPL5P46777 297 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 THOP1P52888 689 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 PPIDQ08752 370 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 TMEM62Q0P6H9 643 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 PRKAA1Q13131 559 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ADGRE1Q14246 886 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 FLOT2Q14254 428 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 CNGA3Q16281 694 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 KIZQ2M2Z5 673 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ANO4Q32M45 955 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 ZNF618Q5T7W0 954 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ADCY4Q8NFM4 1077 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 WNT8BQ93098 351 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 C1QTNF1Q9BXJ1 281 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms