RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ATG4AQ8WYN0 398 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 POM121Q96HA1 1249 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 AK8Q96MA6 479 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 FAM111AQ96PZ2 611 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 THAP2Q9H0W7 228 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-214ENST00000540539 NTN4Q9HB63 628 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 RPRD1BQ9NQG5 326 aaKnown RBP9.64□□□□□ -0.87
CLIP1-214ENST00000540539 SLC35C2Q9NQQ7 365 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 PAQR5Q9NXK6 330 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-214ENST00000540539 ENOPH1Q9UHY7 261 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 SLC24A2Q9UI40 661 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 XPO7Q9UIA9 1087 aaKnown RBP9.64□□□□□ -0.87
CLIP1-214ENST00000540539 MAN2B2Q9Y2E5 1009 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 VWA7Q9Y334 891 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 DGKBQ9Y6T7 804 aa9.64□□□□□ -0.87
CLIP1-214ENST00000540539 PLK4O00444 970 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 TRAF5O00463 557 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 ATG13O75143 517 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 KATNA1O75449 491 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 DNAJB2P25686 324 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 LEPRP48357 1165 aaKnown RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 BLVRAP53004 296 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FKBP3Q00688 224 aaKnown RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 COASYQ13057 564 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FLOT2Q14254 428 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 LRRC41Q15345 812 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 ANKS1BQ7Z6G8 1248 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 GPBP1Q86WP2 473 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 CHAC2Q8WUX2 184 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 TFB1MQ8WVM0 346 aaKnown RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 LPGAT1Q92604 370 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 TMEM80Q96HE8 168 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 MAGED4Q96JG8 741 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 VCPIP1Q96JH7 1222 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 CSF3RQ99062 836 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 TSG101Q99816 390 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 CHST7Q9NS84 486 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 SIRT5Q9NXA8 310 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 TAS2R7Q9NYW3 318 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 CNTN3Q9P232 1028 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FETUBQ9UGM5 382 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 SORCS3Q9UPU3 1222 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 AFG3L2Q9Y4W6 797 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 SNX8Q9Y5X2 465 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 COL1A1P02452 1464 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 POTEB3A0JP26 581 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 MAGEB16A2A368 324 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 A8MUA0 341 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FAM25AB3EWG3 89 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FAM25CB3EWG5 89 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FAM25GB3EWG6 89 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 G3V3G9 751 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 TOR1AO14656 332 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 KLF11O14901 512 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 KPNA6O60684 536 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 SLITRK5O94991 958 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 S100A6P06703 90 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 RETP07949 1114 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 GNAO1P09471 354 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 IL1R1P14778 569 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 MX2P20592 715 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 NPTX2P47972 431 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 IL1RL1Q01638 556 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FUT2Q10981 343 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 AP3B2Q13367 1082 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 AOC3Q16853 763 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 DOK7Q18PE1 504 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 CLEC16AQ2KHT3 1053 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FAM214AQ32MH5 1076 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 ZFP69Q49AA0 526 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 YIF1BQ5BJH7 314 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 IZUMO3Q5VZ72 239 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 CES4AQ5XG92 561 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 POTEBQ6S5H4 581 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FRMD7Q6ZUT3 714 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 KCTD8Q6ZWB6 473 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 ZNF677Q86XU0 584 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 NUDCD3Q8IVD9 361 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 PARP8Q8N3A8 854 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 ZCCHC7Q8N3Z6 543 aaKnown RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 OR13F1Q8NGS4 319 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 MZB1Q8WU39 189 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 EFHD1Q9BUP0 239 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FOXP3Q9BZS1 431 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 COA1Q9GZY4 146 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 GPN2Q9H9Y4 310 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 MCCC2Q9HCC0 563 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 ZC3H7BQ9UGR2 993 aaKnown RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 FBXO40Q9UH90 709 aa9.63□□□□□ -0.87
CLIP1-214ENST00000540539 V9GY48 417 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-214ENST00000540539 LPXNO60711 386 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 DEAF1O75398 565 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 ZMPSTE24O75844 475 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 PIAS1O75925 651 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 ATP5BP06576 529 aaKnown RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CBLP22681 906 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CDH5P33151 784 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 TALDO1P37837 337 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 GHRHRQ02643 423 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms