RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 KCNE1P15382 129 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 ITGAXP20702 1163 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 BDNFP23560 247 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 GABRB3P28472 473 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 BRCC3P46736 316 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 COPAP53621 1224 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 LIMK2P53671 638 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 CCNIQ14094 377 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 C4orf22Q6V702 233 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 NET1Q7Z628 596 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 SLC41A1Q8IVJ1 513 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 URGCPQ8TCY9 931 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 KCTD4Q8WVF5 259 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 COLEC11Q9BWP8 271 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 GATA5Q9BWX5 397 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 TMLHEQ9NVH6 421 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 ADAMTS6Q9UKP5 1117 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 TTC24A2A3L6 582 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 AURKAO14965 403 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 THEMIS2Q5TEJ8 643 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 BHLHA9Q7RTU4 235 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 TAC4Q86UU9 113 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 VPS39Q96JC1 886 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 PPP1R10Q96QC0 940 aaKnown RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 ZNF184Q99676 751 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 CPNE1Q99829 537 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 NUF2Q9BZD4 464 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 EBF3Q9H4W6 596 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 TASP1Q9H6P5 420 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 LRRC40Q9H9A6 602 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 BFARQ9NZS9 450 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 RPL26L1Q9UNX3 145 aaKnown RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 TSC2P49815 1807 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 POMCP01189 267 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 SBK3P0C264 359 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 CNTFP26441 200 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 CHRNA4P43681 627 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 ADAM17P78536 824 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 CDC16Q13042 620 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 SEMA3BQ13214 749 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 MPP3Q13368 585 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 MFSD6LQ8IWD5 586 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 ARHGAP24Q8N264 748 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 WDCPQ9H6R7 721 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 EIF2B3Q9NR50 452 aaKnown RBP14.34□□□□□ -0.11
UBE3B-210ENST00000539599 NDE1Q9NXR1 346 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 LRCH1Q9Y2L9 728 aa14.34□□□□□ -0.11
UBE3B-210ENST00000539599 AIM2O14862 343 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 STRNO43815 780 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 PEX2P28328 305 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 CFAP157Q5JU67 520 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 SPANXN3Q5MJ09 141 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 KCTD11Q693B1 232 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 IQSEC1Q6DN90 963 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 TMEM135Q86UB9 458 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 TDRD5Q8NAT2 981 aaKnown RBP14.33□□□□□ -0.12
UBE3B-210ENST00000539599 PPFIBP2Q8ND30 876 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 LENG8Q96PV6 779 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-210ENST00000539599 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 CDH22Q9UJ99 828 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 NEMP2A6NFY4 417 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 CCL22O00626 93 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 GABRDO14764 452 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 MOCS2O96007 188 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-210ENST00000539599 PNPLA4P41247 253 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 GARSP41250 739 aaKnown RBP14.33□□□□□ -0.12
UBE3B-210ENST00000539599 CACNB2Q08289 660 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-210ENST00000539599 PPIDQ08752 370 aaKnown RBP14.33□□□□□ -0.12
UBE3B-210ENST00000539599 TRMT5Q32P41 509 aaKnown RBP14.33□□□□□ -0.12
UBE3B-210ENST00000539599 DNAL1Q4LDG9 190 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 SFT2D3Q587I9 215 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 GRTP1Q5TC63 336 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 ACMSDQ8TDX5 336 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 SCYL1Q96KG9 808 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 NMRAL1Q9HBL8 299 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 CASS4Q9NQ75 786 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 AK5Q9Y6K8 562 aa14.33□□□□□ -0.12
UBE3B-210ENST00000539599 STX16-NPEPL1H3BU86 382 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 ITGB1P05556 798 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 SKIP12755 728 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 MX2P20592 715 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 SPRP35270 261 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 SERPINB8P50452 374 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 NAGLUP54802 743 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 PDCD2Q16342 344 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 TIGD5Q53EQ6 642 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 XKR4Q5GH76 650 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 SDHAF4Q5VUM1 108 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 ESRP1Q6NXG1 681 aaKnown RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 CEP97Q8IW35 865 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 TOP6BLQ8N6T0 577 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 RAB3IL1Q8TBN0 382 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 USP13Q92995 863 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 MYLPFQ96A32 169 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 TUBGCP5Q96RT8 1024 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms