RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SARDHQ9UL12 918 aa12.86□□□□□ -0.35
VAMP1-206ENST00000538970 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
VAMP1-206ENST00000538970 TP53BP1Q12888 1972 aaPredicted RBP12.86□□□□□ -0.35
VAMP1-206ENST00000538970 FAM149AA5PLN7 773 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 C1QTNF3-AMACRE9PGA6 284 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 I6L893 689 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-206ENST00000538970 M0QYT0 321 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 TLR4O00206 839 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 CBX4O00257 560 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 FOXN3O00409 490 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-206ENST00000538970 MCF2LO15068 1137 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 ITGAVP06756 1048 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 KRT9P35527 623 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 ARRB1P49407 418 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-206ENST00000538970 CDH4P55283 916 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 SNX16P57768 344 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 DLG2Q15700 870 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 MAN2A1Q16706 1144 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 AGBL4Q5VU57 503 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 FAM46CQ5VWP2 391 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 DPY19L2P1Q6NXN4 242 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 Q6ZVU0 165 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 TRIM69Q86WT6 500 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 ZDHHC17Q8IUH5 632 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 FAM71AQ8IYT1 594 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 SH2D3CQ8N5H7 860 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 MLKLQ8NB16 471 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 CNDP2Q96KP4 475 aaKnown RBP12.85□□□□□ -0.35
VAMP1-206ENST00000538970 NPY6RQ99463 290 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 SYNCQ9H7C4 482 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 ANLNQ9NQW6 1124 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 ARHGEF38Q9NXL2 777 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 RRN3Q9NYV6 651 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 PPM1HQ9ULR3 514 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 HS3ST2Q9Y278 367 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 PCDHGA1Q9Y5H4 931 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 KALRNO60229 2985 aa12.85□□□□□ -0.35
VAMP1-206ENST00000538970 TRABD2BA6NFA1 517 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 ENC1O14682 589 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 CNTN5O94779 1100 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 ADCY5O95622 1261 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 SRCP12931 536 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 TFE3P19532 575 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-206ENST00000538970 MAT2AP31153 395 aaKnown RBP12.84□□□□□ -0.35
VAMP1-206ENST00000538970 CDH5P33151 784 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-206ENST00000538970 NUDT1P36639 197 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 RXRGP48443 463 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 CXCR3P49682 368 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 C19orf57Q0VDD7 668 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 POM121L1PQ3SYA9 428 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 ALFQ53S48 1182 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 BRMS1LQ5PSV4 323 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 SFMBT2Q5VUG0 894 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 PRPF39Q86UA1 669 aaKnown RBP12.84□□□□□ -0.35
VAMP1-206ENST00000538970 IQCHQ86VS3 1027 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 SPATS2Q86XZ4 545 aaKnown RBP12.84□□□□□ -0.35
VAMP1-206ENST00000538970 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 OXR1Q8N573 874 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 EID2Q8N6I1 236 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 MFSD2AQ8NA29 543 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 PIP4K2CQ8TBX8 421 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 NT5C3BQ969T7 300 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 PSMB7Q99436 277 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 TKTL2Q9H0I9 626 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 SIK2Q9H0K1 926 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 MUC3BQ9H195 1237 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 ERVMER34-1Q9H9K5 563 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.84□□□□□ -0.35
VAMP1-206ENST00000538970 STAP1Q9ULZ2 295 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 DMTF1Q9Y222 760 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 KNL1Q8NG31 2342 aa12.84□□□□□ -0.35
VAMP1-206ENST00000538970 CABIN1Q9Y6J0 2220 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 SNAP91O60641 907 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 RFPL3O75679 317 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.36
VAMP1-206ENST00000538970 CTSLP07711 333 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 RHOCP08134 193 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 PLA2G2AP14555 144 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 SCNN1AP37088 669 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 ACADVLP49748 655 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 SULT1E1P49888 294 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 TAS2R38P59533 333 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 CYP4F3Q08477 520 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 DNAJC3Q13217 504 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 TPD52L1Q16890 204 aaPredicted RBP12.83□□□□□ -0.36
VAMP1-206ENST00000538970 MIIPQ5JXC2 388 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 KANSL1Q7Z3B3 1105 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 TMPRSS12Q86WS5 348 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
VAMP1-206ENST00000538970 TMEM35BQ8NCS4 154 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 PGAP3Q96FM1 320 aaPredicted RBP12.83□□□□□ -0.36
VAMP1-206ENST00000538970 C2orf49Q9BVC5 232 aaPredicted RBP12.83□□□□□ -0.36
VAMP1-206ENST00000538970 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 WDCPQ9H6R7 721 aa12.83□□□□□ -0.36
VAMP1-206ENST00000538970 PREBQ9HCU5 417 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms