RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 SLC6A17Q9H1V8 727 aa12.62□□□□□ -0.39
CLTCL1-205ENST00000538828 MAGEH1Q9H213 219 aa12.62□□□□□ -0.39
CLTCL1-205ENST00000538828 TSPY26PQ9H489 355 aa12.62□□□□□ -0.39
CLTCL1-205ENST00000538828 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
CLTCL1-205ENST00000538828 SPTBN2O15020 2390 aa12.62□□□□□ -0.39
CLTCL1-205ENST00000538828 ASCC3Q8N3C0 2202 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 PCNX2A6NKB5 2137 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 TMEM191CA6NGB0 347 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 ZSCAN5CA6NGD5 496 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 TTC34A8MYJ7 566 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 CCP110O43303 1012 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 ZMPSTE24O75844 475 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 LRIG2O94898 1065 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 GYPCP04921 128 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 SYPP08247 313 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 GOT1P17174 413 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 NUDT1P36639 197 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 CTSOP43234 321 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 YBEYP58557 167 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 IRX4P78413 519 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 SEMA3BQ13214 749 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 DLG2Q15700 870 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 CDO1Q16878 200 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 TRIM61Q5EBN2 209 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 EFHC2Q5JST6 749 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 SH3PXD2AQ5TCZ1 1133 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 DAB2IPQ5VWQ8 1189 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 TMC6Q7Z403 805 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 RPL10LQ96L21 214 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 EDEM2Q9BV94 578 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 GPR174Q9BXC1 333 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 TMEM9BQ9NQ34 198 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 TMEM74BQ9NUR3 256 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 FBXL12Q9NXK8 326 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 MPP6Q9NZW5 540 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 IFNKQ9P0W0 207 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 VPS51Q9UID3 782 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 FZD10Q9ULW2 581 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 NEU3Q9UQ49 428 aa12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-205ENST00000538828 CABIN1Q9Y6J0 2220 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 A0A1B0GTW7 788 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 C1QTNF3-AMACRE9PGA6 284 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 FGF10O15520 208 aaPredicted RBP12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 GDF9O60383 454 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 RNF8O76064 485 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 SEMA4FO95754 770 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 SRCP12931 536 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 SLC8A1P32418 973 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 PCK1P35558 622 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 GGCXP38435 758 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 GNA12Q03113 381 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 GFPT1Q06210 699 aaPredicted RBP12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 SPECC1LQ69YQ0 1117 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 IL31Q6EBC2 164 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 PCDH20Q8N6Y1 951 aaKnown RBP12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 ZNF366Q8N895 744 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 RTL3Q8N8U3 475 aaKnown RBP12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 TMIEQ8NEW7 156 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 C1orf216Q8TAB5 229 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 EPAS1Q99814 870 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 CATSPERBQ9H7T0 1116 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 CD93Q9NPY3 652 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 TMPRSS4Q9NRS4 437 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 LCMT1Q9UIC8 334 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 PPM1HQ9ULR3 514 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 PCDH15Q96QU1 1955 aa12.6□□□□□ -0.39
CLTCL1-205ENST00000538828 A0A0D9SEW6 157 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 SSU72P8A0A1W2PR75 194 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 LRRC72A6NJI9 287 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 MEI4A8MW99 385 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 CDX4O14627 284 aaPredicted RBP12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 GJB6O95452 261 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 PRNPP04156 253 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 ACSL1P33121 698 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 HCAR3P49019 387 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 STK19P49842 368 aaPredicted RBP12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 SERPINH1P50454 418 aaKnown RBP12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 CCR5P51681 352 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 SLC14A1Q13336 389 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 TDRD12Q587J7 1177 aaKnown RBP12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 DCAF12L1Q5VU92 463 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 IL27RAQ6UWB1 636 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 TFAP2DQ7Z6R9 452 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 RGL4Q8IZJ4 473 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 STK40Q8N2I9 435 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 CCDC185Q8N715 623 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 NIPA2Q8N8Q9 360 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 OR2T34Q8NGX1 318 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 ARHGEF2Q92974 986 aaKnown RBP12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 LRIG1Q96JA1 1093 aa12.59□□□□□ -0.39
CLTCL1-205ENST00000538828 CNOT8Q9UFF9 292 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms