RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CNTN5O94779 1100 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 PYGBP11216 843 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 CSF2RAP15509 400 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 TAC1P20366 129 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 DNAJB2P25686 324 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 FOXN2P32314 431 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 ATP5C1P36542 298 aaKnown RBP20.81■□□□□ 0.92
DDX55-205ENST00000538744 WDR5P61964 334 aaKnown RBP20.81■□□□□ 0.92
DDX55-205ENST00000538744 CDH17Q12864 832 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 ALFQ53S48 1182 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 LVRNQ6Q4G3 990 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 SH2D5Q6ZV89 423 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 TMCO2Q7Z6W1 182 aaPredicted RBP20.81■□□□□ 0.92
DDX55-205ENST00000538744 CHSY1Q86X52 802 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 FATE1Q969F0 183 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 IGSF8Q969P0 613 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 ELAC2Q9BQ52 826 aaKnown RBP20.81■□□□□ 0.92
DDX55-205ENST00000538744 RBM22Q9NW64 420 aaKnown RBP eCLIP20.81■□□□□ 0.923e-13■■■■■ 30.2
DDX55-205ENST00000538744 SPG21Q9NZD8 308 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 UBP1Q9NZI7 540 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 RRP15Q9Y3B9 282 aaKnown RBP20.81■□□□□ 0.92
DDX55-205ENST00000538744 MAGEB16A2A368 324 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 KIAA0754O94854 1291 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 GEMP55040 296 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 MGAT5Q09328 741 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 PDK4Q16654 411 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 C6orf89Q6UWU4 347 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 RGS9BPQ6ZS82 235 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 SRLQ86TD4 932 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 UNC5BQ8IZJ1 945 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 CNPY4Q8N129 248 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 ANKS4BQ8N8V4 417 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 TCP10LQ8TDR4 215 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 RPRD1AQ96P16 312 aaPredicted RBP20.81■□□□□ 0.92
DDX55-205ENST00000538744 IL22Q9GZX6 179 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 NACA2Q9H009 215 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 CYP4F11Q9HBI6 524 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 KIAA1671Q9BY89 1806 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 GOLGA6L7A0A1B0GV03 622 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 HLA-DQB2P05538 268 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 URODP06132 367 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 ITGB8P26012 769 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 ALDH1A3P47895 512 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 NEK3P51956 506 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 FRG1Q14331 258 aaKnown RBP20.8■□□□□ 0.92
DDX55-205ENST00000538744 HECTD3Q5T447 861 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 KLHDC10Q6PID8 442 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 ZNF669Q96BR6 464 aaPredicted RBP20.8■□□□□ 0.92
DDX55-205ENST00000538744 HMCESQ96FZ2 354 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 ZNF419Q96HQ0 510 aaPredicted RBP20.8■□□□□ 0.92
DDX55-205ENST00000538744 APOL2Q9BQE5 337 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 YIPF1Q9Y548 306 aa20.8■□□□□ 0.92
DDX55-205ENST00000538744 FAM237BA0A1B0GVD1 139 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 TRIM43BA6NCK2 446 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 ZNF840PA6NDX5 716 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 KIAA0355O15063 1070 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 USP1O94782 785 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 ALADP13716 330 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 RAG1P15918 1043 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 HMGA1P17096 107 aaKnown RBP20.79■□□□□ 0.92
DDX55-205ENST00000538744 TACR2P21452 398 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 BMPR2Q13873 1038 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 HNRNPDQ14103 355 aaKnown RBP20.79■□□□□ 0.92
DDX55-205ENST00000538744 ITIH4Q14624 930 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 ZKSCAN8Q15776 578 aaPredicted RBP20.79■□□□□ 0.92
DDX55-205ENST00000538744 NADSYN1Q6IA69 706 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 DDX53Q86TM3 631 aaKnown RBP20.79■□□□□ 0.92
DDX55-205ENST00000538744 TMEM135Q86UB9 458 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 RASSF3Q86WH2 238 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.79■□□□□ 0.92
DDX55-205ENST00000538744 SPATA22Q8NHS9 363 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 TRIM43Q96BQ3 446 aaPredicted RBP20.79■□□□□ 0.92
DDX55-205ENST00000538744 CERS2Q96G23 380 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 MYRFLQ96LU7 910 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 TBL1YQ9BQ87 522 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 TRPM5Q9NZQ8 1165 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 GRID1Q9ULK0 1009 aa20.79■□□□□ 0.92
DDX55-205ENST00000538744 COPEO14579 308 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 ADRA1DP25100 572 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 CCNFP41002 786 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 MAPKAPK2P49137 400 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 RENBPP51606 427 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 KCNQ1P51787 676 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 IFT88Q13099 833 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 RAB33AQ14088 237 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 TAF12Q16514 161 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 CERCAMQ5T4B2 595 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 CES3Q6UWW8 571 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 YTHDF3Q7Z739 585 aaKnown RBP20.78■□□□□ 0.92
DDX55-205ENST00000538744 TMEM199Q8N511 208 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.78■□□□□ 0.92
DDX55-205ENST00000538744 LRRC8CQ8TDW0 803 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 FCRL3Q96P31 734 aaPredicted RBP20.78■□□□□ 0.92
DDX55-205ENST00000538744 SP110Q9HB58 689 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 ZFATQ9P243 1243 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 ZNF212Q9UDV6 495 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 F5H5T6 163 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 ATP9BO43861 1147 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 SNX3O60493 162 aa20.78■□□□□ 0.92
DDX55-205ENST00000538744 RAMP2O60895 175 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms