RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 TTC7BQ86TV6 843 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 ACTRT1Q8TDG2 376 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 ING5Q8WYH8 240 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 UROC1Q96N76 676 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 GAS2L1Q99501 681 aaPredicted RBP11.37□□□□□ -0.59
LINC00346-201ENST00000538077 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 KLQ9UEF7 1012 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 A0A096LPK6 155 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 A0A0B4J269 797 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 GLI1P08151 1106 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 MAPTP10636 758 aaKnown RBP11.37□□□□□ -0.59
LINC00346-201ENST00000538077 PEX5P50542 639 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 COX10Q12887 443 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 NCF4Q15080 339 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 GPAT3Q53EU6 434 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 BTN2A1Q7KYR7 527 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 COG5Q9UP83 839 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 SIK3Q9Y2K2 1263 aa11.37□□□□□ -0.59
LINC00346-201ENST00000538077 MAGEB16A2A368 324 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 RIPK2O43353 540 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 GZMAP12544 262 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 VAV1P15498 845 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 CNTFP26441 200 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 SNRPD1P62314 119 aaKnown RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 KLC1Q07866 573 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 CYP2A13Q16696 494 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 CCDC92Q53HC0 331 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 GPR141Q7Z602 305 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 ZC3H7AQ8IWR0 971 aaKnown RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TMEM86AQ8N2M4 240 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 FAM84AQ96KN4 292 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TBCBQ99426 244 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 ASB7Q9H672 318 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PCDH12Q9NPG4 1184 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 NDRG2Q9UN36 371 aaKnown RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 LYVE1Q9Y5Y7 322 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 FRMPD4Q14CM0 1322 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 H0Y858 1186 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PCCBP05166 539 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 CCND1P24385 295 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 FAAP100Q0VG06 881 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 R3HCC1LQ7Z5L2 792 aaKnown RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 CHPFQ8IZ52 775 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 POU5F2Q8N7G0 328 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 GOLGA2P5Q9HBQ8 144 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 ETNK2Q9NVF9 386 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PLK2Q9NYY3 685 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 GULP1Q9UBP9 304 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 VPS51Q9UID3 782 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 NPR3P17342 541 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 RPA3P35244 121 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 NTRK3Q16288 839 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 SCIMPQ6UWF3 145 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 IL31RAQ8NI17 732 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 WDR36Q8NI36 951 aaKnown RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TCP10LQ8TDR4 215 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 NDRG1Q92597 394 aaKnown RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 LACRTQ9GZZ8 138 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 SEMA4AQ9H3S1 761 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 HIPK3Q9H422 1215 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 LRRC4BQ9NT99 713 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 SEPT3Q9UH03 358 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 FFAR2O15552 330 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 OR10H2O60403 315 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 ATG7O95352 703 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 BMP10O95393 424 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PSMC3P17980 439 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 IRAK1P51617 712 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TBX2Q13207 712 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PSRC1Q6PGN9 363 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 CASP12Q6UXS9 341 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 LRRC74BQ6ZQY2 392 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 HEATR4Q86WZ0 1026 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PDLIM2Q96JY6 352 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TP73O15350 636 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 RARAP10276 462 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PECAM1P16284 738 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 CRABP2P29373 138 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 VHLP40337 213 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TRIM71Q2Q1W2 868 aaKnown RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 C3orf20Q8ND61 904 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 MLPHQ9BV36 600 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 PCDH9Q9HC56 1237 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 GNPTGQ9UJJ9 305 aa11.36□□□□□ -0.59
LINC00346-201ENST00000538077 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3DA0A087WVF3 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3IA0A087WXS9 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3EA0A087X179 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3KA0A087X1G2 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3FA6NER0 549 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3LB9A6J9 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 RGS14O43566 566 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 CABYRO75952 493 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3HP0C7X1 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PSMB9P28065 219 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms