RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 FIG4Q92562 907 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 MED30Q96HR3 178 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 ALOXE3Q9BYJ1 711 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 COG4Q9H9E3 785 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 NEK6Q9HC98 313 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 PRM3Q9NNZ6 103 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 ITM2CQ9NQX7 267 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 SEL1LQ9UBV2 794 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 EXOC7Q9UPT5 735 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 PCDHGA7Q9Y5G6 932 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 FAM189A1O60320 539 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 XYLBO75191 536 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 CDH1P12830 882 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 UNGP13051 313 aaPredicted RBP10.89□□□□□ -0.67
RTN3-208ENST00000537981 KRT5P13647 590 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 HOXA7P31268 230 aaPredicted RBP10.89□□□□□ -0.67
RTN3-208ENST00000537981 P2RX3P56373 397 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 ORC2Q13416 577 aaPredicted RBP10.89□□□□□ -0.67
RTN3-208ENST00000537981 PLCL1Q15111 1095 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 FAXCQ5TGI0 409 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 UGT3A1Q6NUS8 523 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 TAS1R3Q7RTX0 852 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 ZNF781Q8N8C0 355 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 SHC3Q92529 594 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 SNX19Q92543 992 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 MAP6Q96JE9 813 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 FANCEQ9HB96 536 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 PCDH9Q9HC56 1237 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 PLSCR3Q9NRY6 295 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 QPCTLQ9NXS2 382 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 SORCS3Q9UPU3 1222 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 ZNF804BA4D1E1 1349 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 SNED1Q8TER0 1413 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 SMCHD1A6NHR9 2005 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 F8VP50 259 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 BCAS2O75934 225 aaPredicted RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 FAM13AO94988 1023 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ACAT1P24752 427 aaKnown RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 ARNTP27540 789 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 PIK3R1P27986 724 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ZNF252P-AS1Q0IIN9 211 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 PTK2BQ14289 1009 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 DGKDQ16760 1214 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 SMTNL2Q2TAL5 461 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ZFP1Q6P2D0 407 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 EPHX4Q8IUS5 362 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ZNF444Q8N0Y2 327 aaPredicted RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 KIAA1958Q8N8K9 716 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 SNX31Q8N9S9 440 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 FAM71DQ8N9W8 422 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 RNF34Q969K3 372 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 GLT1D1Q96MS3 346 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 FRMD6Q96NE9 622 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 C12orf49Q9H741 205 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 TFCP2L1Q9NZI6 479 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 TCAF1Q9Y4C2 921 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 AP4S1Q9Y587 144 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ERVH48-1M5A8F1 160 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 KCNK2O95069 426 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 PRKCGP05129 697 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ADORA2AP29274 412 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 BAG6P46379 1132 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ACOT2P49753 483 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 VAMP7P51809 220 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 GALK2Q01415 458 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 PCLAFQ15004 111 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 Q3C1V9 767 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 SBK1Q52WX2 424 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 ZBTB49Q6ZSB9 765 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 AKAP14Q86UN6 197 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 SLC26A11Q86WA9 606 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 HERC6Q8IVU3 1022 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 PCDH20Q8N6Y1 951 aaKnown RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 ZNF420Q8TAQ5 688 aaPredicted RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 ACTL9Q8TC94 416 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 PIGBQ92521 554 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 NACC1Q96RE7 527 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 CCDC177Q9NQR7 707 aaPredicted RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 C20orf96Q9NUD7 363 aaPredicted RBP10.88□□□□□ -0.67
RTN3-208ENST00000537981 TEX264Q9Y6I9 313 aa10.88□□□□□ -0.67
RTN3-208ENST00000537981 C9IYK1 514 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 SCO2O43819 266 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 GCATO75600 419 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 UFL1O94874 794 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 ADRB2P07550 413 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 SNRPAP09012 282 aaKnown RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 HDCP19113 662 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 HOXD10P28358 340 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 ALDH4A1P30038 563 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CYP2C18P33260 490 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PPP2R2BQ00005 443 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CAVIN4Q5BKX8 364 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 SLC10A5Q5PT55 438 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 TREML2Q5T2D2 321 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 N4BP2L1Q5TBK1 243 aaPredicted RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 ANGEL2Q5VTE6 544 aaKnown RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms