RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ARNTLO00327 626 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 PEX11BO96011 259 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 ASGR2P07307 311 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 SLC6A11P48066 632 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 CLCN6P51797 869 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 YBEYP58557 167 aaPredicted RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 PDGFRLQ15198 375 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 IL31Q6EBC2 164 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 BZW1Q7L1Q6 419 aaKnown RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 CCDC13Q8IYE1 715 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 KIAA1958Q8N8K9 716 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 FIBINQ8TAL6 211 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 HTR3CQ8WXA8 447 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 SLCO2A1Q92959 643 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 CHFRQ96EP1 664 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 FEM1AQ9BSK4 669 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 TRMT61BQ9BVS5 477 aaKnown RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 MAGEH1Q9H213 219 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 ATP13A1Q9HD20 1204 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 RNF103O00237 685 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 NCAM2O15394 837 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 HOXC11O43248 304 aaPredicted RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 HEXIM1O94992 359 aaKnown RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 NFATC1O95644 943 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 ADH1CP00326 375 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 KRT14P02533 472 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 DHX34Q14147 1143 aaKnown RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 PPP1R7Q15435 360 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 FUT11Q495W5 492 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 HEATR6Q6AI08 1181 aaKnown RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 LINGO4Q6UY18 593 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 TSGA13Q96PP4 275 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 ACE2Q9BYF1 805 aaPredicted RBP16■□□□□ 0.15
SFSWAP-206ENST00000537582 ANKZF1Q9H8Y5 726 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 KCNK12Q9HB15 430 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 PDFQ9HBH1 243 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 VPS28Q9UK41 221 aa16■□□□□ 0.15
SFSWAP-206ENST00000537582 CBX4O00257 560 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 CHADO15335 359 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 CTIFO43310 598 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 CACNG3O60359 315 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 ZMPSTE24O75844 475 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 PTPN3P26045 913 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 RPL22P35268 128 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 SOX9P48436 509 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 ARF5P84085 180 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 GAD2Q05329 585 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 RUNX3Q13761 415 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 PTK6Q13882 451 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 SFTPA1Q8IWL2 248 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 ETFBKMTQ8IXQ9 262 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 GRK7Q8WTQ7 553 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 UBXN4Q92575 508 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 RTP4Q96DX8 246 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 PNKPQ96T60 521 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 RETREG1Q9H6L5 497 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 SP110Q9HB58 689 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 DNAJC17Q9NVM6 304 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 DONSONQ9NYP3 566 aa15.99■□□□□ 0.15
SFSWAP-206ENST00000537582 KDELR3O43731 214 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 PRAMEF11O60813 436 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 TULP3O75386 442 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 JCHAINP01591 159 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 CISD3P0C7P0 127 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 CCNCP24863 283 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 ETFBP38117 255 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 CTSOP43234 321 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 OXCT1P55809 520 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 GUCY2DQ02846 1103 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 SLC10A7Q0GE19 358 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 ELF2Q15723 593 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 GEN1Q17RS7 908 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 PITRM1Q5JRX3 1037 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 FAXCQ5TGI0 409 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 TMEM215Q68D42 235 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 MAATS1Q7Z4T9 603 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 ZNF567Q8N184 647 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 CNTD1Q8N815 330 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 CCDC89Q8N998 374 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 KIAA1522Q9P206 1035 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 VPS51Q9UID3 782 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 GGA2Q9UJY4 613 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 SNX24Q9Y343 169 aa15.98■□□□□ 0.15
SFSWAP-206ENST00000537582 ANTXRLA6NF34 631 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 FAM187AA6NFU0 413 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 MATN3O15232 486 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 CD160O95971 181 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 GAS8O95995 478 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 PABPC1P11940 636 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 CCNB1P14635 433 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 GJA4P35212 333 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 KDSRQ06136 332 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 IL10RBQ08334 325 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 PLEKHG6Q3KR16 790 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 SYCP2LQ5T4T6 812 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 IER5LQ5T953 404 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms