RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 A8MU76 341 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 GPR32O75388 356 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 SERPINA6P08185 405 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 CCDC130P13994 396 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 MIPP30301 263 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 CDKN2BP42772 138 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 TSPY1Q01534 308 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 MAP2K5Q13163 448 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 ADGRD1Q6QNK2 874 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 NUDCD3Q8IVD9 361 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 C12orf43Q96C57 262 aaKnown RBP14.26□□□□□ -0.13
LIG1-203ENST00000536218 ITPKCQ96DU7 683 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 APOPT1Q96IL0 206 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 KLHL25Q9H0H3 589 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 SIAEQ9HAT2 523 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 NMRK2Q9NPI5 230 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 PDGFRAP16234 1089 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 ETV4P43268 484 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 NDST2P52849 883 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 OTUD4Q01804 1114 aaKnown RBP14.26□□□□□ -0.13
LIG1-203ENST00000536218 NR1D2Q14995 579 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 ZNF829Q3KNS6 432 aaPredicted RBP14.26□□□□□ -0.13
LIG1-203ENST00000536218 NIPAL1Q6NVV3 410 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 CDHR3Q6ZTQ4 885 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 GPR141Q7Z602 305 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 KBTBD6Q86V97 674 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 SCUBE3Q8IX30 993 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 HPS1Q92902 700 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 CENPOQ9BU64 300 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 MAN1C1Q9NR34 630 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 IGSF9Q9P2J2 1179 aa14.26□□□□□ -0.13
LIG1-203ENST00000536218 INHBAP08476 426 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 RPL10P27635 214 aaKnown RBP14.25□□□□□ -0.13
LIG1-203ENST00000536218 NRLP54845 237 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 ESRRGP62508 458 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 FKBP1BP68106 108 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 TRIM16LQ309B1 348 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 ATG16L1Q676U5 607 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 NOTUMQ6P988 496 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 DHRS4L2Q6PKH6 230 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 RFX6Q8HWS3 928 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 IQCF2Q8IXL9 164 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 ACTL9Q8TC94 416 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 KLC2Q9H0B6 622 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 EHD1Q9H4M9 534 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 GID8Q9NWU2 228 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 CDC14AQ9UNH5 594 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 NRCAMQ92823 1304 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 TRIP11Q15643 1979 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 MAP3K6O95382 1288 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 SLC25A11Q02978 314 aaKnown RBP14.25□□□□□ -0.13
LIG1-203ENST00000536218 MMRN1Q13201 1228 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 TBCCQ15814 346 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 KLHL38Q2WGJ6 581 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 FAM183BPQ6ZVS7 135 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 CTAGE3PQ8IX95 158 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 FBXO36Q8NEA4 188 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 RXFP2Q8WXD0 754 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 ISOC1Q96CN7 298 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 RANBP9Q96S59 729 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 NGRNQ9NPE2 291 aaKnown RBP14.25□□□□□ -0.13
LIG1-203ENST00000536218 GPATCH2LQ9NWQ4 482 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 C6orf203Q9P0P8 240 aaPredicted RBP14.25□□□□□ -0.13
LIG1-203ENST00000536218 GJD2Q9UKL4 321 aa14.25□□□□□ -0.13
LIG1-203ENST00000536218 A0A1W2PQ67 120 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 SIN3BO75182 1162 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 F2P00734 622 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 DARSP14868 501 aaKnown RBP14.24□□□□□ -0.13
LIG1-203ENST00000536218 ADORA2BP29275 332 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 MAPK10P53779 464 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 BNIP3Q12983 259 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 KCNJ8Q15842 424 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 RGS21Q2M5E4 152 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 LRRC38Q5VT99 294 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 PMF1Q6P1K2 205 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 FBXW8Q8N3Y1 598 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 CCDC33Q8N5R6 958 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 RNF148Q8N7C7 305 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 DCAKDQ8WVC6 231 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 FERMT1Q9BQL6 677 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 DDX56Q9NY93 547 aaKnown RBP14.24□□□□□ -0.13
LIG1-203ENST00000536218 USP18Q9UMW8 372 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 ANK1P16157 1881 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 SCN1AP35498 2009 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 IQANK1A0A1B0GTG1 560 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 DGKIO75912 1065 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 HMGCRP04035 888 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 DHRS4L1P0CG22 281 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 KDELR1P24390 212 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 PSEN2P49810 448 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 KYAT1Q16773 422 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 DCAF4L1Q3SXM0 396 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 MSS51Q4VC12 460 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 ZNF618Q5T7W0 954 aa14.24□□□□□ -0.13
LIG1-203ENST00000536218 VASH1Q7L8A9 365 aaPredicted RBP14.24□□□□□ -0.13
LIG1-203ENST00000536218 LRRN4Q8WUT4 740 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms