RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PPP1R9BQ96SB3 815 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHFR-211ENST00000535897 CLMPQ9H6B4 373 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 POLR1BQ9H9Y6 1135 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 PREBQ9HCU5 417 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 FZD3Q9NPG1 666 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 DYRK4Q9NR20 520 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 KLHL11Q9NVR0 708 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 DNAJC28Q9NX36 388 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 VPS28Q9UK41 221 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 SARDHQ9UL12 918 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 COQ4Q9Y3A0 265 aa8.27□□□□□ -1.09
CHFR-211ENST00000535897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 CPED1A4D0V7 1026 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 TCAF2A6NFQ2 919 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 KCNU1A8MYU2 1149 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 C10orf142B7Z368 130 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 B8ZZF3 427 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 MCF2LO15068 1137 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 ALOX15BO15296 676 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 SLC28A2O43868 658 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 PIAS2O75928 621 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 NEBLO76041 1014 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 PCDH8O95206 1070 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 TRUB2O95900 331 aaKnown RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 KRT5P13647 590 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 AKT2P31751 481 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 ACADSBP45954 432 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 LSSP48449 732 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 FMO5P49326 533 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 DUSP3P51452 185 aaPredicted RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 CLDN2P57739 230 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 YWHAZP63104 245 aaKnown RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 KRT85P78386 507 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 FKBP3Q00688 224 aaKnown RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 CENPCQ03188 943 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 KCNC4Q03721 635 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 CCDC15Q0P6D6 951 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 CETN1Q12798 172 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 ZNF177Q13360 481 aaPredicted RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 DLG2Q15700 870 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 ZNF542PQ5EBM4 170 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 CDCP2Q5VXM1 449 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 PRICKLE2Q7Z3G6 844 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 PTAR1Q7Z6K3 402 aaPredicted RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 OR13H1Q8NG92 308 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 IFI44Q8TCB0 444 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 FRS2Q8WU20 508 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 ERCC4Q92889 916 aaPredicted RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 KAT5Q92993 513 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 SLC35C1Q96A29 364 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 WBP1Q96G27 269 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 VCPIP1Q96JH7 1222 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 CCDC114Q96M63 670 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 ZSWIM1Q9BR11 485 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 DPH1Q9BZG8 443 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 SEMA4CQ9C0C4 833 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 MUC3BQ9H195 1237 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 SYNDIG1Q9H7V2 258 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 POPDC2Q9HBU9 364 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHFR-211ENST00000535897 RMND1Q9NWS8 449 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 NLGN3Q9NZ94 848 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 PPM1HQ9ULR3 514 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 SATB2Q9UPW6 733 aa8.26□□□□□ -1.09
CHFR-211ENST00000535897 FARP1Q9Y4F1 1045 aaPredicted RBP8.26□□□□□ -1.09
CHFR-211ENST00000535897 A6NNZ2 444 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 E5RJQ4 531 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 RNF225M0QZC1 329 aaPredicted RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 DXOO77932 396 aaKnown RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 GP1BAP07359 652 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 SLC2A3P11169 496 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 KRT10P13645 584 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 HNRNPA2B1P22626 353 aaKnown RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 PRCPP42785 496 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 TAS2R38P59533 333 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 MCCD1P59942 119 aaPredicted RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 HNRNPKP61978 463 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHFR-211ENST00000535897 MAPK8IP2Q13387 824 aaPredicted RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 CDKN3Q16667 212 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 CCDC40Q4G0X9 1142 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 PIP5KL1Q5T9C9 394 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 KIAA1614Q5VZ46 1190 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 ANKRD40Q6AI12 368 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 OR6B2Q6IFH4 312 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 CXorf57Q6NSI4 855 aaKnown RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 CCDC81Q6ZN84 652 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 RRAGAQ7L523 313 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 HORMAD1Q86X24 394 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 ATP11CQ8NB49 1132 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 TMEM145Q8NBT3 493 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 GRIN3AQ8TCU5 1115 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 FAM131CQ96AQ9 280 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 CCDC97Q96F63 343 aaPredicted RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 MED8Q96G25 268 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 ATXN7L3BQ96GX2 97 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 NOX5Q96PH1 765 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 FEM1AQ9BSK4 669 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 DUSP23Q9BVJ7 150 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 CAAP1Q9H8G2 361 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms