RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 IRAK1P51617 712 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 SNX16P57768 344 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 CNTN1Q12860 1018 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 POM121L1PQ3SYA9 428 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 SETMARQ53H47 684 aaPredicted RBP17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 FAM183BPQ6ZVS7 135 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 Q6ZVU0 165 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 TRIM69Q86WT6 500 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 OR52K2Q8NGK3 314 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 SHC3Q92529 594 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 TSC1Q92574 1164 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 DCBLD2Q96PD2 775 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 APEX2Q9UBZ4 518 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 HS3ST4Q9Y661 456 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 ITPR1Q14643 2758 aa17.33■□□□□ 0.36
CAPRIN1-216ENST00000534042 PRAMEF26H0Y7S4 382 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 M0QYT0 321 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 PAGE1O75459 146 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 GGCXP38435 758 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 APBA1Q02410 837 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 PTK2Q05397 1052 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 TARDBPQ13148 414 aaKnown RBP eCLIP17.32■□□□□ 0.365e-13■■■□□ 15.2
CAPRIN1-216ENST00000534042 EXOC3L4Q17RC7 722 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 HES3Q5TGS1 186 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 AGBL4Q5VU57 503 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 SFMBT2Q5VUG0 894 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 FBXL19Q6PCT2 694 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 OLFML1Q6UWY5 402 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 SH2D3CQ8N5H7 860 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 C1orf131Q8NDD1 294 aaKnown RBP17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 SIK2Q9H0K1 926 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 MUC3BQ9H195 1237 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 SYNCQ9H7C4 482 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 OR51B4Q9Y5P0 310 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 AK5Q9Y6K8 562 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 IGSF10Q6WRI0 2623 aa17.32■□□□□ 0.36
CAPRIN1-216ENST00000534042 TRPM6Q9BX84 2022 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 EIF4E1BA6NMX2 242 aaKnown RBP17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 DAB1O75553 588 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 ERBB2P04626 1255 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 CKMT2P17540 419 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 NOS2P35228 1153 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 KRT9P35527 623 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 ABCG1P45844 678 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 CDH4P55283 916 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 KRT83P78385 493 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 SLC6A3Q01959 620 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 ILKQ13418 452 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 C5orf22Q49AR2 442 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 SLC26A9Q7LBE3 791 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 KANSL1Q7Z3B3 1105 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 C14orf80Q86SX3 495 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 KLHDC7BQ96G42 594 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 PREBQ9HCU5 417 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 RWDD2AQ9UIY3 292 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 TBC1D30Q9Y2I9 924 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 PTPRQQ9UMZ3 2332 aa17.31■□□□□ 0.36
CAPRIN1-216ENST00000534042 GTPBP10A4D1E9 387 aaKnown RBP17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 SDC3O75056 442 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 GADD45BO75293 160 aaPredicted RBP17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 RHOCP08134 193 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 PON1P27169 355 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 SEMG2Q02383 582 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 CCDC15Q0P6D6 951 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 ATP11CQ8NB49 1132 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 CCDC114Q96M63 670 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 NRSN2Q9GZP1 204 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 RRN3Q9NYV6 651 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 HS3ST2Q9Y278 367 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 CA5BQ9Y2D0 317 aa17.3■□□□□ 0.36
CAPRIN1-216ENST00000534042 KPNA3O00505 521 aaPredicted RBP17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 SLC31A1O15431 190 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 RNGTTO60942 597 aaKnown RBP17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 CNTN5O94779 1100 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 SRCP12931 536 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 CHRNA3P32297 505 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 TAS2R38P59533 333 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 PTPN20Q4JDL3 420 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 BRMS1LQ5PSV4 323 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 SMYD5Q6GMV2 418 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 NEK5Q6P3R8 708 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 ZNF397Q8NF99 534 aaPredicted RBP17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 CRELD1Q96HD1 420 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 BBC3Q96PG8 261 aaPredicted RBP17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 PSMB7Q99436 277 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 NPY6RQ99463 290 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 C2orf49Q9BVC5 232 aaPredicted RBP17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 WDCPQ9H6R7 721 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 DYRK4Q9NR20 520 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 DNAJC12Q9UKB3 198 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 STAP1Q9ULZ2 295 aa17.29■□□□□ 0.36
CAPRIN1-216ENST00000534042 CELSR3Q9NYQ7 3312 aa17.28■□□□□ 0.36
CAPRIN1-216ENST00000534042 DOCK4Q8N1I0 1966 aa17.28■□□□□ 0.36
CAPRIN1-216ENST00000534042 A0A1W2PQU0 124 aa17.28■□□□□ 0.36
CAPRIN1-216ENST00000534042 FOXN3O00409 490 aaPredicted RBP17.28■□□□□ 0.36
CAPRIN1-216ENST00000534042 SNAP91O60641 907 aa17.28■□□□□ 0.36
CAPRIN1-216ENST00000534042 ADCY5O95622 1261 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms