RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ZNF48	Q96MX3	618 aa	Predicted RBP	5.05	□□□□□ -1.6
ATM-223	ENST00000533979	ADPGK	Q9BRR6	497 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	SPRTN	Q9H040	489 aa	Predicted RBP	5.05	□□□□□ -1.6
ATM-223	ENST00000533979	CHODL	Q9H9P2	273 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	ELOVL5	Q9NYP7	299 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	SEMA5B	Q9P283	1151 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	VPS51	Q9UID3	782 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	FZD4	Q9ULV1	537 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	DNAJC16	Q9Y2G8	782 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	SLC27A6	Q9Y2P4	619 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	DERA	Q9Y315	318 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	ZNF711	Q9Y462	761 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	SNX8	Q9Y5X2	465 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	ABCA5	Q8WWZ7	1642 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	MADD	Q8WXG6	1647 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	PASK	Q96RG2	1323 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979		E7EVH7	732 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	GTPBP1	O00178	669 aa	Known RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	AP3D1	O14617	1153 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	TSPAN3	O60637	253 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	KRT38	O76015	456 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	HSPA4L	O95757	839 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	FGB	P02675	491 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	IGKV2-30	P06310	120 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ANXA6	P08133	673 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ADRA1D	P25100	572 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	KLRK1	P26718	216 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ATIC	P31939	592 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	MCM5	P33992	734 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	IFI35	P80217	286 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	DEUP1	Q05D60	604 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ZNF268	Q14587	947 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	GPR68	Q15743	365 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	BTBD16	Q32M84	506 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	FAXC	Q5TGI0	409 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	CLEC9A	Q6UXN8	241 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	H1FNT	Q75WM6	255 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	MRPL10	Q7Z7H8	261 aa	Known RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	NDUFAF2	Q8N183	169 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ZNF366	Q8N895	744 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	MAFA	Q8NHW3	353 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	AFAP1L1	Q8TED9	768 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	MAP4K1	Q92918	833 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	C3orf49	Q96BT1	292 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	HS6ST2	Q96MM7	605 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	SIGLEC11	Q96RL6	698 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ITPA	Q9BY32	194 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	EPS8L2	Q9H6S3	715 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	EIF2B3	Q9NR50	452 aa	Known RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ATP8A2	Q9NTI2	1148 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	RIMKLB	Q9ULI2	386 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	HPSE	Q9Y251	543 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	SNX5	Q9Y5X3	404 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	ADAMTSL3	P82987	1691 aa		5.04	□□□□□ -1.6
ATM-223	ENST00000533979	WRN	Q14191	1432 aa	Predicted RBP eCLIP	5.04	□□□□□ -1.6
ATM-223	ENST00000533979	RIMS1	Q86UR5	1692 aa	Known RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	VWA3A	A6NCI4	1184 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	FAM90A18P	A6NE21	464 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	FAM90A16P	A6NEW6	464 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	OR2W5	A6NFC9	320 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	FAM90A9P	A6NNJ1	464 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	FAM90A5P	A8MXJ8	464 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	DHX16	O60231	1041 aa	Known RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	BMP15	O95972	392 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	CLTB	P09497	229 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	FAM90A15P	P0C7V4	464 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	FAM90A14P	P0C7W9	464 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	MUT	P22033	750 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	SLC5A2	P31639	672 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	PSMC2	P35998	433 aa	Known RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	MCM2	P49736	904 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	PLCD1	P51178	756 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	CREB5	Q02930	508 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	CALD1	Q05682	793 aa	Known RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	DNASE1L3	Q13609	305 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	FHL3	Q13643	280 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	SCARB2	Q14108	478 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	KCNAB1	Q14722	419 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	RABEP1	Q15276	862 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	RASA2	Q15283	850 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	TBCE	Q15813	527 aa	Predicted RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	DEF8	Q6ZN54	512 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	PXK	Q7Z7A4	578 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	ADSSL1	Q8N142	457 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	C9orf106	Q8NAJ2	232 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	OSR1	Q8TAX0	266 aa	Predicted RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	ZBTB9	Q96C00	473 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	YME1L1	Q96TA2	773 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	SYNC	Q9H7C4	482 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	ZBTB26	Q9HCK0	441 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	ARGLU1	Q9NWB6	273 aa	Predicted RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	KLHL13	Q9P2N7	655 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	RPS6KA6	Q9UK32	745 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	ISY1	Q9ULR0	285 aa	Known RBP	5.03	□□□□□ -1.6
ATM-223	ENST00000533979	HSF4	Q9ULV5	492 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	PCDHGB4	Q9UN71	923 aa		5.03	□□□□□ -1.6
ATM-223	ENST00000533979	ADCY10	Q96PN6	1610 aa		5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms