RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ACAD11Q709F0 780 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 CCDC80Q76M96 950 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 CDRT15Q96T59 188 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 TDRKHQ9Y2W6 561 aaKnown RBP19.71■□□□□ 0.75
CAPN1-226ENST00000533820 A0A0J9YVX5 310 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.71■□□□□ 0.75
CAPN1-226ENST00000533820 H3BRB1 525 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 RECQL4O94761 1208 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 SNX16P57768 344 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 PDK3Q15120 406 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 FAM156AQ8NDB6 213 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 USP33Q8TEY7 942 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 KBTBD7Q8WVZ9 684 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 CATSPER2Q96P56 530 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 TUT1Q9H6E5 874 aaKnown RBP19.71■□□□□ 0.75
CAPN1-226ENST00000533820 TASP1Q9H6P5 420 aa19.71■□□□□ 0.75
CAPN1-226ENST00000533820 CCDC166P0CW27 439 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 CYP2C8P10632 490 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 MLNP12872 115 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 MATKP42679 507 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 HARS2P49590 506 aaKnown RBP19.7■□□□□ 0.74
CAPN1-226ENST00000533820 FOLH1Q04609 750 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 ZNF460Q14592 562 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.7■□□□□ 0.74
CAPN1-226ENST00000533820 RNF169Q8NCN4 708 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 RBBP8Q99708 897 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 CENPKQ9BS16 269 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 NFKBIZQ9BYH8 718 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 INIPQ9NRY2 104 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 PIGVQ9NUD9 493 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 PCDHB12Q9Y5F1 795 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 CCDC160A6NGH7 325 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 G3V2L1 256 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 ZBTB24O43167 697 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-226ENST00000533820 JUNP05412 331 aaKnown RBP19.7■□□□□ 0.74
CAPN1-226ENST00000533820 SPRP35270 261 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-226ENST00000533820 PDK1Q15118 436 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 C9orf57Q5W0N0 161 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 FAM219BQ5XKK7 198 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 GALNT4Q8N4A0 578 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 ICA1LQ8NDH6 482 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 BEST2Q8NFU1 509 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 SLC7A14Q8TBB6 771 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 URGCPQ8TCY9 931 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 SGF29Q96ES7 293 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 CPNE1Q99829 537 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 FAM192AQ9GZU8 254 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 NMRAL1Q9HBL8 299 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 BFARQ9NZS9 450 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 DNAJB4Q9UDY4 337 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 CDY2AQ9Y6F7 541 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 CDY1Q9Y6F8 540 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 BPTFQ12830 3046 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 H3BNX3 289 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 NAGLUP54802 743 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 GK3PQ14409 553 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 SLC44A4Q53GD3 710 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 FBXO47Q5MNV8 452 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 KDELC2Q7Z4H8 507 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 SLC15A3Q8IY34 581 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 FERMT1Q9BQL6 677 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 DTNAQ9Y4J8 743 aa19.7■□□□□ 0.74
CAPN1-226ENST00000533820 ATP6V1B1P15313 513 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 HOXA11P31270 313 aaPredicted RBP19.69■□□□□ 0.74
CAPN1-226ENST00000533820 GRM5P41594 1212 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 GALK1P51570 392 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 THOP1P52888 689 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 MAP7D1Q3KQU3 841 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 FSCBQ5H9T9 825 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 EPGNQ6UW88 154 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 PTAR1Q7Z6K3 402 aaPredicted RBP19.69■□□□□ 0.74
CAPN1-226ENST00000533820 TTC39CQ8N584 583 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 CELF6Q96J87 481 aaKnown RBP19.69■□□□□ 0.74
CAPN1-226ENST00000533820 DHRS1Q96LJ7 313 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 ANLNQ9NQW6 1124 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 SH3GLB1Q9Y371 365 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 NDUFB5O43674 189 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 TRIM13O60858 407 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 ERCC2P18074 760 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 ALDH1A3P47895 512 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 SERPINB8P50452 374 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 SLC25A52Q3SY17 297 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.69■□□□□ 0.74
CAPN1-226ENST00000533820 GRTP1Q5TC63 336 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 ZDHHC17Q8IUH5 632 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 CCNYL1Q8N7R7 359 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 LENG1Q96BZ8 264 aaPredicted RBP19.69■□□□□ 0.74
CAPN1-226ENST00000533820 RCN3Q96D15 328 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 MPP4Q96JB8 637 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 APBA2Q99767 749 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 OMDQ99983 421 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 SIKE1Q9BRV8 207 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 COPS7BQ9H9Q2 264 aaPredicted RBP19.69■□□□□ 0.74
CAPN1-226ENST00000533820 APPL1Q9UKG1 709 aa19.69■□□□□ 0.74
CAPN1-226ENST00000533820 KPNA7A9QM74 516 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 PIGNO95427 931 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 ASLP04424 464 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 ARSAP15289 507 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 XRCC1P18887 633 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms