RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TPX2Q9ULW0 747 aaKnown RBP18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 HS3ST4Q9Y661 456 aa18.94■□□□□ 0.62
SSSCA1-206ENST00000531405 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 SLC7A4O43246 635 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 TLX3O43711 291 aaPredicted RBP18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 HSF2BPO75031 334 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 C1SP09871 688 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 ZNF18P17022 549 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 ITPKBP27987 946 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 ZNF177Q13360 481 aaPredicted RBP18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 EFHC1Q5JVL4 640 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 FAM46CQ5VWP2 391 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 OR6B2Q6IFH4 312 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 TRIM69Q86WT6 500 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 OXR1Q8N573 874 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 C1orf131Q8NDD1 294 aaKnown RBP18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 MYOCQ99972 504 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 KDM4CQ9H3R0 1056 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 ASNSD1Q9NWL6 643 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 VPS28Q9UK41 221 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 OR51B4Q9Y5P0 310 aa18.93■□□□□ 0.62
SSSCA1-206ENST00000531405 C1QTNF3-AMACRE9PGA6 284 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 MCF2LO15068 1137 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 GADD45BO75293 160 aaPredicted RBP18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 PAGE1O75459 146 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 ERBB2P04626 1255 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 GLI1P08151 1106 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 ABCG1P45844 678 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 VASPP50552 380 aaPredicted RBP18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 OXCT1P55809 520 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 TAS2R38P59533 333 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 STAT4Q14765 748 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 OTUD1Q5VV17 481 aaPredicted RBP18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 OLFML1Q6UWY5 402 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 SH2D3CQ8N5H7 860 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 KLK6Q92876 244 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 SIK2Q9H0K1 926 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 CAAP1Q9H8G2 361 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 APEX2Q9UBZ4 518 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 AJAP1Q9UKB5 411 aaPredicted RBP18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 DMTF1Q9Y222 760 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 AK5Q9Y6K8 562 aa18.92■□□□□ 0.62
SSSCA1-206ENST00000531405 CNTN5O94779 1100 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 MT-CO1P00395 513 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 CTSLP07711 333 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 CDK4P11802 303 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 PRLRP16471 622 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 CKMT2P17540 419 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 SETMARQ53H47 684 aaPredicted RBP18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 C11orf57Q6ZUT1 292 aaPredicted RBP18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 IQCHQ86VS3 1027 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 SHC3Q92529 594 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 MUC3BQ9H195 1237 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 PLCB1Q9NQ66 1216 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 ANLNQ9NQW6 1124 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 PCDHGC3Q9UN70 934 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 SNX10Q9Y5X0 201 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 SETXQ7Z333 2677 aaKnown RBP18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 CFAP46Q8IYW2 2715 aa18.91■□□□□ 0.62
SSSCA1-206ENST00000531405 FAM170AA1A519 330 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 PRAMEF26H0Y7S4 382 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 K7ERQ8 282 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 M0QYT0 321 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 RNF103O00237 685 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 TRIM38O00635 465 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 ALOX15BO15296 676 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 SNAP91O60641 907 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 RNGTTO60942 597 aaKnown RBP18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 CLDN11O75508 207 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 DAB1O75553 588 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 PNMA6AP0CW24 399 aaPredicted RBP18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 SRCP12931 536 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 TFE3P19532 575 aaPredicted RBP18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 PTPN20Q4JDL3 420 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 ALFQ53S48 1182 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 PIP5KL1Q5T9C9 394 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 GBP6Q6ZN66 633 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 PPP1R9BQ96SB3 815 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 PSMB7Q99436 277 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 FZD3Q9NPG1 666 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 PIGVQ9NUD9 493 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 TBC1D30Q9Y2I9 924 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 CHD5Q8TDI0 1954 aa18.9■□□□□ 0.62
SSSCA1-206ENST00000531405 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 I6L893 689 aaPredicted RBP18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 SLC31A1O15431 190 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 SIGLEC6O43699 453 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 MAGEC1O60732 1142 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 ADCY5O95622 1261 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 FGFR1OPO95684 399 aaKnown RBP18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 NUDT1P36639 197 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 EIF2S3P41091 472 aaKnown RBP18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 CDH4P55283 916 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 SLC6A3Q01959 620 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 OVGP1Q12889 678 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 PROX2Q3B8N5 592 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 SLC25A45Q8N413 288 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 ARRDC3Q96B67 414 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 KLHDC7BQ96G42 594 aa18.89■□□□□ 0.61
SSSCA1-206ENST00000531405 FAM81BQ96LP2 452 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms