RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 STN1Q9H668 368 aaKnown RBP5.07□□□□□ -1.6
CTR9-204ENST00000529355 ZBTB40Q9NUA8 1239 aa5.07□□□□□ -1.6
CTR9-204ENST00000529355 TRBV5-7A0A0A0MS05 114 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 RRN3P2A6NIE6 340 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 HSD3B1P14060 373 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 NR4A2P43354 598 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 TUBP50607 506 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 PAPOLAP51003 745 aaKnown RBP5.06□□□□□ -1.6
CTR9-204ENST00000529355 RPS6KA3P51812 740 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 TMPRSS3P57727 454 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 GAD2Q05329 585 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 BYSLQ13895 437 aaKnown RBP5.06□□□□□ -1.6
CTR9-204ENST00000529355 DLGAP5Q15398 846 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 GALNT7Q86SF2 657 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 SCAIQ8N9R8 606 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 SLC44A5Q8NCS7 719 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 MAELQ96JY0 434 aaKnown RBP5.06□□□□□ -1.6
CTR9-204ENST00000529355 ZFYVE19Q96K21 471 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 TTYH1Q9H313 450 aaPredicted RBP5.06□□□□□ -1.6
CTR9-204ENST00000529355 HIPK3Q9H422 1215 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 CXorf56Q9H5V9 222 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 PCDHA12Q9UN75 941 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 ICKQ9UPZ9 632 aa5.06□□□□□ -1.6
CTR9-204ENST00000529355 PEX12O00623 359 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 USP12O75317 370 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 EPN2O95208 641 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 CHRNA5P30532 468 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 HNF1BP35680 557 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 PLK5Q496M5 336 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 C6orf10Q5SRN2 563 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 PXDC1Q5TGL8 231 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 FAM171A1Q5VUB5 890 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 LRCH2Q5VUJ6 765 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 ANKRD44Q8N8A2 993 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 SETD9Q8NE22 299 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 TMEM174Q8WUU8 243 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 EIF2AK1Q9BQI3 630 aaKnown RBP5.05□□□□□ -1.6
CTR9-204ENST00000529355 LMAN2LQ9H0V9 348 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 MAP6D1Q9H9H5 199 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 NOD2Q9HC29 1040 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 SEMA4BQ9NPR2 832 aaPredicted RBP5.05□□□□□ -1.6
CTR9-204ENST00000529355 RASSF1Q9NS23 344 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 TMEM160Q9NX00 188 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 CD207Q9UJ71 328 aa5.05□□□□□ -1.6
CTR9-204ENST00000529355 DDTLA6NHG4 134 aaPredicted RBP5.04□□□□□ -1.6
CTR9-204ENST00000529355 FAM90A7PA6NKC0 464 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 FAM90A22PA8MWA6 464 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 FAM90A12PA8MX19 464 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 FAM90A23PA8MXZ1 464 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 EYA2O00167 538 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 NCAM2O15394 837 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 PRPF4O43172 522 aaKnown RBP eCLIP5.04□□□□□ -1.6
CTR9-204ENST00000529355 CBX6O95503 412 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 DDAH2O95865 285 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 LMO1P25800 156 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 CYP2J2P51589 502 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 CHRNDQ07001 517 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 INPP5JQ15735 1006 aaPredicted RBP5.04□□□□□ -1.6
CTR9-204ENST00000529355 TAF12Q16514 161 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 SYTL3Q4VX76 610 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 ISM2Q6H9L7 571 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 RINLQ6ZS11 566 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 BBS12Q6ZW61 710 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 CERS3Q8IU89 383 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 LRRC57Q8N9N7 239 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 INPP5DQ92835 1189 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 WDR83Q9BRX9 315 aaKnown RBP5.04□□□□□ -1.6
CTR9-204ENST00000529355 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.04□□□□□ -1.6
CTR9-204ENST00000529355 CADM1Q9BY67 442 aaKnown RBP5.04□□□□□ -1.6
CTR9-204ENST00000529355 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.04□□□□□ -1.6
CTR9-204ENST00000529355 MROH8Q9H579 483 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 C9orf78Q9NZ63 289 aaPredicted RBP5.04□□□□□ -1.6
CTR9-204ENST00000529355 IFT80Q9P2H3 777 aaPredicted RBP5.04□□□□□ -1.6
CTR9-204ENST00000529355 CDH22Q9UJ99 828 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 HSF4Q9ULV5 492 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 HS3ST3B1Q9Y662 390 aa5.04□□□□□ -1.6
CTR9-204ENST00000529355 METTL18O95568 372 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 AGR2O95994 175 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 TNFSF8P32971 234 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 ME1P48163 572 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 CCT5P48643 541 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 MCM2P49736 904 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 OAZ1P54368 228 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 UBE3AQ05086 875 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 SRSF1Q07955 248 aaKnown RBP eCLIP5.03□□□□□ -1.6
CTR9-204ENST00000529355 RAPGEF1Q13905 1077 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 EFR3AQ14156 821 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 ANKRD1Q15327 319 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 C5orf22Q49AR2 442 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 MAP3K21Q5TCX8 1036 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 ATG16L1Q676U5 607 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 DENND1BQ6P3S1 775 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 AAGABQ6PD74 315 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 LVRNQ6Q4G3 990 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 KDELC2Q7Z4H8 507 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 TMTC1Q8IUR5 882 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 SMAP1Q8IYB5 467 aaPredicted RBP5.03□□□□□ -1.6
CTR9-204ENST00000529355 MMP21Q8N119 569 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 ARFGAP1Q8N6T3 406 aa5.03□□□□□ -1.6
CTR9-204ENST00000529355 PIGOQ8TEQ8 1089 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms