RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ZNF397Q8NF99 534 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 SAP25Q8TEE9 199 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 CNDP2Q96KP4 475 aaKnown RBP22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 PIGVQ9NUD9 493 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 PPM1HQ9ULR3 514 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 TBC1D30Q9Y2I9 924 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 KNTC1P50748 2209 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 FAM170AA1A519 330 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 CNTN5O94779 1100 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 ADCY5O95622 1261 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 F9P00740 461 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 RHOCP08134 193 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 CYP4F3Q08477 520 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 DRAP1Q14919 205 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 BRMS1LQ5PSV4 323 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 SMYD5Q6GMV2 418 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 ERICH1Q86X53 443 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 FAM71AQ8IYT1 594 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 SH2D3CQ8N5H7 860 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 C18orf8Q96DM3 657 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 NPY6RQ99463 290 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 TUBGCP2Q9BSJ2 902 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 PAXBP1Q9Y5B6 917 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 OR51B4Q9Y5P0 310 aa22.97■■□□□ 1.27
TRAPPC4-208ENST00000527680 NYNRINQ9P2P1 1898 aaKnown RBP22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 CBX4O00257 560 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 ALOX15BO15296 676 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 LATO43561 262 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 PLRG1O43660 514 aaKnown RBP22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 MAGEC1O60732 1142 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 NUDT1P36639 197 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 CXCR3P49682 368 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 NXPH1P58417 271 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 BNIP3Q12983 259 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 SHBQ15464 509 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 SMAD1Q15797 465 aaKnown RBP22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 TAF3Q5VWG9 929 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 HNRNPLLQ8WVV9 542 aaKnown RBP22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 CCDC114Q96M63 670 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 C2orf49Q9BVC5 232 aaPredicted RBP22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 ARHGEF38Q9NXL2 777 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 ARHGAP20Q9P2F6 1191 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 RAXQ9Y2V3 346 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 GPSM3Q9Y4H4 160 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 SNX10Q9Y5X0 201 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 DOCK9Q9BZ29 2069 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 ACACAQ13085 2346 aa22.96■■□□□ 1.27
TRAPPC4-208ENST00000527680 MT-CO1P00395 513 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 JUPP14923 745 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 TFE3P19532 575 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 CCDC15Q0P6D6 951 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 DNAJC3Q13217 504 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 ALFQ53S48 1182 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 FAM102AQ5T9C2 384 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 ANKRD11Q6UB99 2663 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 OXR1Q8N573 874 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 PDCD7Q8N8D1 485 aaKnown RBP22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 ERVMER34-1Q9H9K5 563 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 DYRK4Q9NR20 520 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 DACH1Q9UI36 760 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 DMTF1Q9Y222 760 aa22.95■■□□□ 1.26
TRAPPC4-208ENST00000527680 ADAMTS20P59510 1910 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 KPNA3O00505 521 aaPredicted RBP22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 SNAP91O60641 907 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 SRGAP2O75044 1071 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 SRCP12931 536 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 CYP11B1P15538 503 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 C5orf22Q49AR2 442 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 SETMARQ53H47 684 aaPredicted RBP22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 AGBL4Q5VU57 503 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 TMPRSS12Q86WS5 348 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 TBCBQ99426 244 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 MPP6Q9NZW5 540 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 PCDHGA1Q9Y5H4 931 aa22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 URB1O60287 2271 aaKnown RBP22.94■■□□□ 1.26
TRAPPC4-208ENST00000527680 C10orf142B7Z368 130 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 PRAMEF26H0Y7S4 382 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 GOLGA8SH3BPF8 625 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 RNGTTO60942 597 aaKnown RBP22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 HOXB3P14651 431 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 EPHA8P29322 1005 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 OR1E1P30953 314 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 CHRNA3P32297 505 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 RECQLP46063 649 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 COL28A1Q2UY09 1125 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 SLC25A52Q3SY17 297 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 MIIPQ5JXC2 388 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 KLHDC7AQ5VTJ3 777 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 OTUD1Q5VV17 481 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 LINGO4Q6UY18 593 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 TFAP2DQ7Z6R9 452 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 SETD3Q86TU7 594 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 IQCHQ86VS3 1027 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 TRIM69Q86WT6 500 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 SPATS2Q86XZ4 545 aaKnown RBP22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 MSANTD4Q8NCY6 345 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 KLK6Q92876 244 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 KLHDC7BQ96G42 594 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 C1orf74Q96LT6 269 aa22.93■■□□□ 1.26
TRAPPC4-208ENST00000527680 SPON2Q9BUD6 331 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms