RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ARPP21Q9UBL0 812 aaPredicted RBP5.46□□□□□ -1.54
PABPC1-223ENST00000523636 DPP7Q9UHL4 492 aa5.46□□□□□ -1.54
PABPC1-223ENST00000523636 CBLCQ9ULV8 474 aa5.46□□□□□ -1.54
PABPC1-223ENST00000523636 SLC8A2Q9UPR5 921 aa5.46□□□□□ -1.54
PABPC1-223ENST00000523636 LRCH1Q9Y2L9 728 aa5.46□□□□□ -1.54
PABPC1-223ENST00000523636 BAZ2BQ9UIF8 2168 aaKnown RBP5.46□□□□□ -1.54
PABPC1-223ENST00000523636 MYO18AQ92614 2054 aaKnown RBP5.46□□□□□ -1.54
PABPC1-223ENST00000523636 PTPRCP08575 1304 aa5.46□□□□□ -1.54
PABPC1-223ENST00000523636 TGP01266 2768 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 NUP210Q8TEM1 1887 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 TDRD15B5MCY1 1934 aaKnown RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 WDR27A2RRH5 827 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 FAM25EA8MYX2 175 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 RASA4BC9J798 803 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 M0QZ92 97 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 M0R2C6 588 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 RASA4O43374 803 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 DKC1O60832 514 aaKnown RBP eCLIP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 B3GALNT1O75752 331 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 CFIP05156 583 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 RHOP08100 348 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 SERPINF2P08697 491 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 POU2F2P09086 479 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 HNRNPA1P09651 372 aaKnown RBP eCLIP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 BPIP17213 487 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 DESP17661 470 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 HOXA9P31269 272 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 ELF1P32519 619 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 CD86P42081 329 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 GLUD2P49448 558 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 DNM2P50570 870 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 GALK1P51570 392 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 RCAN1P53805 252 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 TMPRSS3P57727 454 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 RNASELQ05823 741 aaKnown RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 PCBP2Q15366 365 aaKnown RBP eCLIP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 SKOR2Q2VWA4 1001 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 C1QL3Q5VWW1 255 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 IRGCQ6NXR0 463 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 MTHFD1LQ6UB35 978 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 DHRS13Q6UX07 377 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 B3GNT9Q6UX72 402 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 RPTNQ6XPR3 784 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 DBX2Q6ZNG2 339 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 ARHGAP36Q6ZRI8 547 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 IQCA1Q86XH1 822 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 TRIM48Q8IWZ4 208 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 CHST14Q8NCH0 376 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 FAM168AQ92567 244 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 USP7Q93009 1102 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 HSPBAP1Q96EW2 488 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 MSANTD3Q96H12 275 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 TMEM176AQ96HP8 235 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 NAF1Q96HR8 494 aaKnown RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 INPP4AQ96PE3 977 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 TAAR9Q96RI9 348 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 ADPGKQ9BRR6 497 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 MENTQ9BUN1 341 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 ZNF552Q9H707 407 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 DCTPP1Q9H773 170 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 C8orf33Q9H7E9 229 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 IFT22Q9H7X7 185 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 ZFP14Q9HCL3 533 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 TRMT1Q9NXH9 659 aaKnown RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 FAM53CQ9NYF3 392 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 KLHL14Q9P2G3 628 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 WDR35Q9P2L0 1181 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 B4GALT6Q9UBX8 382 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 DSEQ9UL01 958 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 GPR34Q9UPC5 381 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 TNNQ9UQP3 1299 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 BTBD3Q9Y2F9 522 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 SLC4A4Q9Y6R1 1079 aa5.45□□□□□ -1.54
PABPC1-223ENST00000523636 ARID1BQ8NFD5 2236 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 ZFC3H1O60293 1989 aaKnown RBP5.45□□□□□ -1.54
PABPC1-223ENST00000523636 KMT2CQ8NEZ4 4911 aaKnown RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 NSD1Q96L73 2696 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 NOTCH1P46531 2555 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ZNF263O14978 683 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 SGSM2O43147 1006 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 APBB3O95704 486 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 EGFP01133 1207 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 KRT1P04264 644 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 AMY2AP04746 511 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 RPLP2P05387 115 aaKnown RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 HSPD1P10809 573 aaKnown RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 HNRNPLP14866 589 aaKnown RBP eCLIP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 AMY2BP19961 511 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 FGFR4P22455 802 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 SMARCA1P28370 1054 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 KRT9P35527 623 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 DGKEP52429 567 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 EPHA5P54756 1037 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 TFAP4Q01664 338 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 FCHO2Q0JRZ9 810 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 MEA1Q16626 185 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 INAVAQ3KP66 663 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 PREPLQ4J6C6 727 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 FIGNQ5HY92 759 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 TMEM196Q5HYL7 178 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms