RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 EPHB6O15197 1021 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 FAM189A1O60320 539 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 PRAMEF10O60809 474 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 TCEA3O75764 348 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 KRT18P05783 430 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 PAX3P23760 479 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 HOXD13P35453 343 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ETV5P41161 510 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 MAGEA11P43364 429 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 HARS2P49590 506 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 CASP5P51878 434 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ZBED6P86452 979 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 TSPY1Q01534 308 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 KCNMA1Q12791 1236 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 PPP2R5AQ15172 486 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ENOX2Q16206 610 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 MEA1Q16626 185 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 CDKN3Q16667 212 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 FIGNQ5HY92 759 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF569Q5MCW4 686 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 FKBP15Q5T1M5 1219 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 JADE1Q6IE81 842 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 FAM171BQ6P995 826 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 DENND5BQ6ZUT9 1274 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 HTR3DQ70Z44 454 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 EPM2AIP1Q7L775 607 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 EFL1Q7Z2Z2 1120 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 MTERF4Q7Z6M4 381 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 SFR1Q86XK3 245 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ZC3H3Q8IXZ2 948 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 TEX19Q8NA77 164 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 PRR7Q8TB68 274 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 JPH3Q8WXH2 748 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 DRC1Q96MC2 740 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 PCMTD1Q96MG8 357 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 CEP63Q96MT8 703 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 CCDC43Q96MW1 224 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ACBD6Q9BR61 282 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 RUSC1Q9BVN2 902 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 CARD6Q9BX69 1037 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 NDST4Q9H3R1 872 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ZHX3Q9H4I2 956 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 TUFT1Q9NNX1 390 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 LZTFL1Q9NQ48 299 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 PRSS16Q9NQE7 514 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 PRDM8Q9NQV8 689 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 TMEM30AQ9NV96 361 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ELOVL2Q9NXB9 296 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 SEPT10Q9P0V9 454 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ARHGAP20Q9P2F6 1191 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 ARHGAP28Q9P2N2 729 aa7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 DIDO1Q9BTC0 2240 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-227ENST00000521387 POLEQ07864 2286 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 A0A1W2PQJ5 194 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 CPED1A4D0V7 1026 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 EME2A4GXA9 379 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 C9orf172C9J069 976 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 NKX2-8O15522 239 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 ATP2C2O75185 946 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PIAS2O75928 621 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 FAM155BO75949 473 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 NEBLO76041 1014 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PRPF6O94906 941 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 NDUFA10O95299 355 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 C4BPAP04003 597 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 CLTAP09496 248 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 IRF1P10914 325 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 ITIH1P19827 911 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 NPTX2P47972 431 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PPP3CCP48454 512 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PGFP49763 221 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 CCR5P51681 352 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PPP2CBP62714 309 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PPP2CAP67775 309 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 FKBP3Q00688 224 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 ZBTB16Q05516 673 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 MCL1Q07820 350 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF177Q13360 481 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 CCDC40Q4G0X9 1142 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 DCAF6Q58WW2 860 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 RINT1Q6NUQ1 792 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 RAB11FIP2Q7L804 512 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 DAW1Q8N136 415 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 SLC35F6Q8N357 371 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PDCL2Q8N4E4 241 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 HPS1Q92902 700 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 HEXIM2Q96MH2 286 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 REEP2Q9BRK0 252 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 NEUROG2Q9H2A3 272 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 CCSER2Q9H7U1 834 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 USP29Q9HBJ7 922 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 PRDM9Q9NQV7 894 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 NLGN3Q9NZ94 848 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 TRIM10Q9UDY6 481 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 L1RE1Q9UN81 338 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 TFR2Q9UP52 801 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 CA5BQ9Y2D0 317 aa7.57□□□□□ -1.2
CTNNA1-227ENST00000521387 TTLL8A6PVC2 850 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms